Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.41□□□□□ -1.86
CNGA1P29973 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CNGA1P29973 AL590705.4-201ENST00000532209 134 ntBASIC3.41□□□□□ -1.86
CNGA1P29973 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
CNGA1P29973 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.41□□□□□ -1.86
CNGA1P29973 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.41□□□□□ -1.86
CNGA1P29973 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CNGA1P29973 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.4□□□□□ -1.86
CNGA1P29973 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.86
CNGA1P29973 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.4□□□□□ -1.86
CNGA1P29973 RNU6-490P-201ENST00000362985 107 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 Y_RNA.463-201ENST00000384271 102 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 MIR218-1-201ENST00000384999 110 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 RPL32P35-201ENST00000415214 394 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 MTCO2P12-201ENST00000427426 682 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.4□□□□□ -1.87
CNGA1P29973 RPS12P18-201ENST00000442381 270 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.4□□□□□ -1.87
CNGA1P29973 AC021146.2-201ENST00000504736 556 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 RNU6-264P-201ENST00000517134 104 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 AC105245.1-201ENST00000581934 244 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 RPL30P11-203ENST00000598995 310 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.4□□□□□ -1.87
CNGA1P29973 Z98751.3-201ENST00000604447 521 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CNGA1P29973 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CNGA1P29973 AL035425.3-201ENST00000564206 4996 ntBASIC3.4□□□□□ -1.87
CNGA1P29973 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.39□□□□□ -1.87
CNGA1P29973 MIR369-201ENST00000362155 70 ntBASIC3.39□□□□□ -1.87
CNGA1P29973 Y_RNA.138-201ENST00000363462 102 ntBASIC3.39□□□□□ -1.87
CNGA1P29973 SNORA18.3-201ENST00000384122 132 ntBASIC3.39□□□□□ -1.87
CNGA1P29973 AC012306.1-201ENST00000423267 114 ntBASIC3.39□□□□□ -1.87
CNGA1P29973 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.39□□□□□ -1.87
CNGA1P29973 Z82188.1-201ENST00000436709 154 ntBASIC3.39□□□□□ -1.87
CNGA1P29973 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.39□□□□□ -1.87
CNGA1P29973 AL353752.1-201ENST00000454946 260 ntBASIC3.39□□□□□ -1.87
CNGA1P29973 AC080013.2-201ENST00000460866 323 ntBASIC3.39□□□□□ -1.87
CNGA1P29973 AC117440.1-201ENST00000474107 571 ntBASIC3.39□□□□□ -1.87
CNGA1P29973 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC3.39□□□□□ -1.87
CNGA1P29973 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.39□□□□□ -1.87
CNGA1P29973 RNU6-976P-201ENST00000516086 111 ntBASIC3.39□□□□□ -1.87
CNGA1P29973 RNU6-567P-201ENST00000516746 107 ntBASIC3.39□□□□□ -1.87
CNGA1P29973 AC010928.2-201ENST00000588017 287 ntBASIC3.39□□□□□ -1.87
CNGA1P29973 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC3.39□□□□□ -1.87
CNGA1P29973 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CNGA1P29973 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.39□□□□□ -1.87
CNGA1P29973 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CNGA1P29973 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CNGA1P29973 AC062016.1-201ENST00000355719 319 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 SNORD115-32-201ENST00000364079 82 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 SET-203ENST00000372688 801 ntTSL 2 BASIC3.38□□□□□ -1.87
CNGA1P29973 RNA5SP494-201ENST00000410653 129 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 RNA5SP344-201ENST00000411081 104 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 RNA5SP508-201ENST00000411327 119 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.38□□□□□ -1.87
CNGA1P29973 AC087499.2-201ENST00000432861 149 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.38□□□□□ -1.87
CNGA1P29973 RPS3P1-201ENST00000456781 192 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 AC073901.1-201ENST00000462471 408 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 AC087477.1-201ENST00000465747 340 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.38□□□□□ -1.87
CNGA1P29973 RNU6-1153P-201ENST00000516760 105 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.38□□□□□ -1.87
CNGA1P29973 AC104581.2-201ENST00000572227 430 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 MIR3616-201ENST00000584070 92 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 AL356055.1-201ENST00000602528 446 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 AC069294.1-201ENST00000608397 350 ntBASIC3.38□□□□□ -1.87
CNGA1P29973 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.38□□□□□ -1.87
CNGA1P29973 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.38□□□□□ -1.87
CNGA1P29973 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CNGA1P29973 AC026241.1-201ENST00000517873 2142 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CNGA1P29973 RNU4-56P-201ENST00000364700 142 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 Y_RNA.577-201ENST00000384794 101 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 MTCYBP2-201ENST00000407745 171 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 RPS26P42-201ENST00000413485 326 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 Z96811.1-201ENST00000445880 108 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 AL109933.2-201ENST00000452651 260 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 AP000705.1-201ENST00000454567 350 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 snoU13.30-201ENST00000458951 104 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 AC023141.11-201ENST00000508864 202 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 RNU6-699P-201ENST00000517081 110 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CNGA1P29973 CYP4A27P-201ENST00000567218 190 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 7SK.7-201ENST00000603504 247 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 uc_338.22-201ENST00000622722 187 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 MTND4P27-201ENST00000450813 1354 ntBASIC3.37□□□□□ -1.87
CNGA1P29973 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNGA1P29973 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CNGA1P29973 Y_RNA.5-201ENST00000362334 102 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 RNU4-15P-201ENST00000362613 141 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 Y_RNA.112-201ENST00000363250 102 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 RNU6-99P-201ENST00000364721 107 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 MIR196B-201ENST00000384852 84 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 MIR627-201ENST00000384979 97 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 SNORA12.2-201ENST00000391040 156 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 RNU6-700P-201ENST00000391043 107 ntBASIC3.36□□□□□ -1.87
CNGA1P29973 RNA5SP201-201ENST00000410316 124 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 341.3 ms