Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 MTCYBP2-201ENST00000407745 171 ntBASIC1.98□□□□□ -2.09
VCLP18206 AP000275.1-201ENST00000411943 390 ntBASIC1.98□□□□□ -2.09
VCLP18206 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VCLP18206 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.98□□□□□ -2.09
VCLP18206 AC027124.2-201ENST00000428249 105 ntBASIC1.98□□□□□ -2.09
VCLP18206 AL121890.1-201ENST00000435457 205 ntBASIC1.98□□□□□ -2.09
VCLP18206 AL353689.1-201ENST00000438895 199 ntBASIC1.98□□□□□ -2.09
VCLP18206 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.98□□□□□ -2.09
VCLP18206 snoU13.26-201ENST00000459452 105 ntBASIC1.98□□□□□ -2.09
VCLP18206 Y_RNA.654-201ENST00000497848 106 ntBASIC1.98□□□□□ -2.09
VCLP18206 HMGB3P17-201ENST00000504195 649 ntBASIC1.98□□□□□ -2.09
VCLP18206 RNU6-991P-201ENST00000516168 107 ntBASIC1.98□□□□□ -2.09
VCLP18206 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.98□□□□□ -2.09
VCLP18206 AL512360.1-201ENST00000555346 234 ntBASIC1.98□□□□□ -2.09
VCLP18206 AC021231.3-201ENST00000558497 370 ntBASIC1.98□□□□□ -2.09
VCLP18206 AC109446.1-201ENST00000566172 220 ntBASIC1.98□□□□□ -2.09
VCLP18206 AC005034.5-201ENST00000604219 466 ntBASIC1.98□□□□□ -2.09
VCLP18206 AL022345.1-201ENST00000607292 135 ntBASIC1.98□□□□□ -2.09
VCLP18206 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.98□□□□□ -2.09
VCLP18206 Y_RNA.783-201ENST00000613546 102 ntBASIC1.98□□□□□ -2.09
VCLP18206 AL359880.1-201ENST00000621879 266 ntBASIC1.98□□□□□ -2.09
VCLP18206 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.98□□□□□ -2.09
VCLP18206 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
VCLP18206 AC233981.2-201ENST00000611524 1614 ntBASIC1.98□□□□□ -2.09
VCLP18206 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.97□□□□□ -2.09
VCLP18206 Y_RNA.378-201ENST00000365652 113 ntBASIC1.97□□□□□ -2.09
VCLP18206 SNORA26.3-201ENST00000391119 136 ntBASIC1.97□□□□□ -2.09
VCLP18206 RNA5SP489-201ENST00000410986 109 ntBASIC1.97□□□□□ -2.09
VCLP18206 AL139156.1-201ENST00000412785 841 ntBASIC1.97□□□□□ -2.09
VCLP18206 BX510359.4-201ENST00000423750 193 ntBASIC1.97□□□□□ -2.09
VCLP18206 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC1.97□□□□□ -2.09
VCLP18206 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC1.97□□□□□ -2.09
VCLP18206 MTND3P16-201ENST00000452205 344 ntBASIC1.97□□□□□ -2.09
VCLP18206 RPL23AP3-201ENST00000453844 468 ntBASIC1.97□□□□□ -2.09
VCLP18206 AC104564.1-201ENST00000493028 407 ntBASIC1.97□□□□□ -2.09
VCLP18206 AC008628.2-201ENST00000502605 298 ntBASIC1.97□□□□□ -2.09
VCLP18206 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC1.97□□□□□ -2.09
VCLP18206 RNU6-1069P-201ENST00000516612 133 ntBASIC1.97□□□□□ -2.09
VCLP18206 Y_RNA.693-201ENST00000516641 110 ntBASIC1.97□□□□□ -2.09
VCLP18206 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.97□□□□□ -2.09
VCLP18206 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.97□□□□□ -2.09
VCLP18206 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC1.97□□□□□ -2.09
VCLP18206 AC243960.4-201ENST00000600532 288 ntBASIC1.97□□□□□ -2.09
VCLP18206 AL357078.3-201ENST00000607528 618 ntBASIC1.97□□□□□ -2.09
VCLP18206 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.97□□□□□ -2.09
VCLP18206 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
VCLP18206 U3.9-201ENST00000363823 204 ntBASIC1.96□□□□□ -2.1
VCLP18206 Y_RNA.194-201ENST00000363985 102 ntBASIC1.96□□□□□ -2.1
VCLP18206 CALM2P3-201ENST00000400429 449 ntBASIC1.96□□□□□ -2.1
VCLP18206 AL158823.1-201ENST00000418441 478 ntBASIC1.96□□□□□ -2.1
VCLP18206 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC1.96□□□□□ -2.1
VCLP18206 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.96□□□□□ -2.1
VCLP18206 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.96□□□□□ -2.1
VCLP18206 HMGN2P3-201ENST00000433603 273 ntBASIC1.96□□□□□ -2.1
VCLP18206 HMGN2P5-201ENST00000436882 273 ntBASIC1.96□□□□□ -2.1
VCLP18206 MTND2P29-201ENST00000438595 412 ntBASIC1.96□□□□□ -2.1
VCLP18206 MTND1P1-201ENST00000445453 368 ntBASIC1.96□□□□□ -2.1
VCLP18206 RPL23AP6-201ENST00000446637 472 ntBASIC1.96□□□□□ -2.1
VCLP18206 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.96□□□□□ -2.1
VCLP18206 snoU13.15-201ENST00000459407 104 ntBASIC1.96□□□□□ -2.1
VCLP18206 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.96□□□□□ -2.1
VCLP18206 MIR449C-201ENST00000516047 92 ntBASIC1.96□□□□□ -2.1
VCLP18206 RNU6-835P-201ENST00000516974 104 ntBASIC1.96□□□□□ -2.1
VCLP18206 RNA5SP490-201ENST00000517141 136 ntBASIC1.96□□□□□ -2.1
VCLP18206 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.96□□□□□ -2.1
VCLP18206 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.96□□□□□ -2.1
VCLP18206 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.96□□□□□ -2.1
VCLP18206 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.96□□□□□ -2.1
VCLP18206 AC078795.3-201ENST00000602913 472 ntBASIC1.96□□□□□ -2.1
VCLP18206 CYP2C61P-201ENST00000604072 290 ntBASIC1.96□□□□□ -2.1
VCLP18206 AL627230.6-201ENST00000611129 280 ntBASIC1.96□□□□□ -2.1
VCLP18206 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.96□□□□□ -2.1
VCLP18206 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
VCLP18206 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
VCLP18206 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
VCLP18206 RNU1-58P-201ENST00000362413 163 ntBASIC1.95□□□□□ -2.1
VCLP18206 RNU6-234P-201ENST00000365229 104 ntBASIC1.95□□□□□ -2.1
VCLP18206 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.95□□□□□ -2.1
VCLP18206 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.95□□□□□ -2.1
VCLP18206 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.95□□□□□ -2.1
VCLP18206 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.95□□□□□ -2.1
VCLP18206 U8.21-201ENST00000459536 136 ntBASIC1.95□□□□□ -2.1
VCLP18206 SNORA19.2-201ENST00000516013 114 ntBASIC1.95□□□□□ -2.1
VCLP18206 RNU6-612P-201ENST00000516909 102 ntBASIC1.95□□□□□ -2.1
VCLP18206 AP005660.1-201ENST00000522972 293 ntBASIC1.95□□□□□ -2.1
VCLP18206 AC025423.5-201ENST00000550230 219 ntBASIC1.95□□□□□ -2.1
VCLP18206 AL118558.2-201ENST00000556294 238 ntBASIC1.95□□□□□ -2.1
VCLP18206 CYP4A27P-201ENST00000567218 190 ntBASIC1.95□□□□□ -2.1
VCLP18206 AC103591.3-201ENST00000608684 209 ntBASIC1.95□□□□□ -2.1
VCLP18206 AC092807.2-201ENST00000609367 243 ntBASIC1.95□□□□□ -2.1
VCLP18206 U1.36-201ENST00000620684 176 ntBASIC1.95□□□□□ -2.1
VCLP18206 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.95□□□□□ -2.1
VCLP18206 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
VCLP18206 AC009541.1-201ENST00000438279 2662 ntBASIC1.95□□□□□ -2.1
VCLP18206 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.94□□□□□ -2.1
VCLP18206 RNU6-1164P-201ENST00000364428 107 ntBASIC1.94□□□□□ -2.1
VCLP18206 RNU4-20P-201ENST00000365601 151 ntBASIC1.94□□□□□ -2.1
VCLP18206 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
VCLP18206 RNU6-214P-201ENST00000384130 107 ntBASIC1.94□□□□□ -2.1
VCLP18206 AL079342.1-201ENST00000401460 267 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms