Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ZNF321P-202ENST00000550843 495 ntBASIC0.76□□□□□ -2.29
APOEP02649 AL137100.2-201ENST00000555786 315 ntBASIC0.76□□□□□ -2.29
APOEP02649 AL021879.1-201ENST00000611756 288 ntBASIC0.76□□□□□ -2.29
APOEP02649 MIR6835-201ENST00000621552 64 ntBASIC0.76□□□□□ -2.29
APOEP02649 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
APOEP02649 SNORD56.2-201ENST00000363242 71 ntBASIC0.75□□□□□ -2.29
APOEP02649 RNU6-17P-201ENST00000384245 107 ntBASIC0.75□□□□□ -2.29
APOEP02649 RNU6-18P-201ENST00000384527 107 ntBASIC0.75□□□□□ -2.29
APOEP02649 MTCYBP2-201ENST00000407745 171 ntBASIC0.75□□□□□ -2.29
APOEP02649 AC243964.1-201ENST00000441814 261 ntBASIC0.75□□□□□ -2.29
APOEP02649 RPL31P3-201ENST00000458430 332 ntBASIC0.75□□□□□ -2.29
APOEP02649 RNU7-14P-201ENST00000459331 62 ntBASIC0.75□□□□□ -2.29
APOEP02649 RPS26P45-201ENST00000471748 340 ntBASIC0.75□□□□□ -2.29
APOEP02649 RBBP4P6-201ENST00000508098 202 ntBASIC0.75□□□□□ -2.29
APOEP02649 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC0.75□□□□□ -2.29
APOEP02649 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.75□□□□□ -2.29
APOEP02649 AC022616.6-201ENST00000520479 119 ntBASIC0.75□□□□□ -2.29
APOEP02649 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.75□□□□□ -2.29
APOEP02649 AC011604.1-201ENST00000545978 196 ntBASIC0.75□□□□□ -2.29
APOEP02649 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC0.75□□□□□ -2.29
APOEP02649 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.75□□□□□ -2.29
APOEP02649 AC016727.2-201ENST00000603988 621 ntBASIC0.75□□□□□ -2.29
APOEP02649 AC107304.1-201ENST00000604229 296 ntBASIC0.75□□□□□ -2.29
APOEP02649 AL158042.1-201ENST00000605338 460 ntBASIC0.75□□□□□ -2.29
APOEP02649 AC013244.3-201ENST00000605614 388 ntBASIC0.75□□□□□ -2.29
APOEP02649 AL139286.2-201ENST00000606838 396 ntBASIC0.75□□□□□ -2.29
APOEP02649 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.75□□□□□ -2.29
APOEP02649 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC0.75□□□□□ -2.29
APOEP02649 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.75□□□□□ -2.29
APOEP02649 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.75□□□□□ -2.29
APOEP02649 U4.7-201ENST00000638126 106 ntBASIC0.75□□□□□ -2.29
APOEP02649 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC0.75□□□□□ -2.29
APOEP02649 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.74□□□□□ -2.29
APOEP02649 Y_RNA.116-201ENST00000363292 103 ntBASIC0.74□□□□□ -2.29
APOEP02649 RNU6-105P-201ENST00000363909 104 ntBASIC0.74□□□□□ -2.29
APOEP02649 RNU2-64P-201ENST00000411315 191 ntBASIC0.74□□□□□ -2.29
APOEP02649 COX6CP10-201ENST00000416832 224 ntBASIC0.74□□□□□ -2.29
APOEP02649 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.74□□□□□ -2.29
APOEP02649 AL590135.1-201ENST00000422215 156 ntBASIC0.74□□□□□ -2.29
APOEP02649 AC019205.3-201ENST00000424573 156 ntBASIC0.74□□□□□ -2.29
APOEP02649 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.74□□□□□ -2.29
APOEP02649 AC016700.2-201ENST00000446011 156 ntBASIC0.74□□□□□ -2.29
APOEP02649 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC0.74□□□□□ -2.29
APOEP02649 MTND1P12-201ENST00000455231 147 ntBASIC0.74□□□□□ -2.29
APOEP02649 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.74□□□□□ -2.29
APOEP02649 AC015911.1-201ENST00000495111 156 ntBASIC0.74□□□□□ -2.29
APOEP02649 AC016550.1-201ENST00000505348 785 ntBASIC0.74□□□□□ -2.29
APOEP02649 MTND3P25-201ENST00000509243 135 ntBASIC0.74□□□□□ -2.29
APOEP02649 PSMC1P5-201ENST00000512850 177 ntBASIC0.74□□□□□ -2.29
APOEP02649 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.74□□□□□ -2.29
APOEP02649 AC008752.3-201ENST00000588113 712 ntBASIC0.74□□□□□ -2.29
APOEP02649 AC126177.8-201ENST00000618339 1015 ntBASIC0.74□□□□□ -2.29
APOEP02649 AC136475.10-201ENST00000620253 385 ntBASIC0.74□□□□□ -2.29
APOEP02649 AC106858.1-201ENST00000637497 429 ntBASIC0.74□□□□□ -2.29
APOEP02649 SNORD31B-201ENST00000364977 69 ntBASIC0.73□□□□□ -2.29
APOEP02649 RNU6-39P-201ENST00000384344 107 ntBASIC0.73□□□□□ -2.29
APOEP02649 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.73□□□□□ -2.29
APOEP02649 RNA5SP111-201ENST00000411386 101 ntBASIC0.73□□□□□ -2.29
APOEP02649 MTCO1P21-201ENST00000416634 589 ntBASIC0.73□□□□□ -2.29
APOEP02649 AC000111.3-201ENST00000433478 193 ntBASIC0.73□□□□□ -2.29
APOEP02649 AL358794.1-201ENST00000445689 381 ntBASIC0.73□□□□□ -2.29
APOEP02649 ZNF736P4Y-201ENST00000454995 1243 ntBASIC0.73□□□□□ -2.29
APOEP02649 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.73□□□□□ -2.29
APOEP02649 AC016925.1-201ENST00000458303 298 ntBASIC0.73□□□□□ -2.29
APOEP02649 AC104982.1-201ENST00000478775 574 ntBASIC0.73□□□□□ -2.29
APOEP02649 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.73□□□□□ -2.29
APOEP02649 AC117454.1-201ENST00000491120 168 ntBASIC0.73□□□□□ -2.29
APOEP02649 RNA5SP220-201ENST00000516298 104 ntBASIC0.73□□□□□ -2.29
APOEP02649 RNA5SP337-201ENST00000517007 109 ntBASIC0.73□□□□□ -2.29
APOEP02649 SNORA70.22-201ENST00000517160 124 ntBASIC0.73□□□□□ -2.29
APOEP02649 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.73□□□□□ -2.29
APOEP02649 AP003168.1-201ENST00000530091 307 ntBASIC0.73□□□□□ -2.29
APOEP02649 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC0.73□□□□□ -2.29
APOEP02649 AC133485.1-201ENST00000567176 124 ntBASIC0.73□□□□□ -2.29
APOEP02649 AC138907.6-201ENST00000568401 126 ntBASIC0.73□□□□□ -2.29
APOEP02649 MIR4709-201ENST00000577272 72 ntBASIC0.73□□□□□ -2.29
APOEP02649 MIR3136-201ENST00000583498 78 ntBASIC0.73□□□□□ -2.29
APOEP02649 HMGN1P30-201ENST00000589286 268 ntBASIC0.73□□□□□ -2.29
APOEP02649 AL590095.2-201ENST00000604136 117 ntBASIC0.73□□□□□ -2.29
APOEP02649 AL157786.1-207ENST00000627771 695 ntBASIC0.73□□□□□ -2.29
APOEP02649 RNU6-43P-201ENST00000384302 107 ntBASIC0.72□□□□□ -2.29
APOEP02649 SNORA24.1-201ENST00000384401 135 ntBASIC0.72□□□□□ -2.29
APOEP02649 MIR508-201ENST00000384857 115 ntBASIC0.72□□□□□ -2.29
APOEP02649 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.72□□□□□ -2.29
APOEP02649 RNA5SP201-201ENST00000410316 124 ntBASIC0.72□□□□□ -2.29
APOEP02649 AC114482.1-201ENST00000418010 247 ntBASIC0.72□□□□□ -2.29
APOEP02649 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.72□□□□□ -2.29
APOEP02649 RNU6-1223P-201ENST00000517124 104 ntBASIC0.72□□□□□ -2.29
APOEP02649 DEFB108E-201ENST00000524692 240 ntBASIC0.72□□□□□ -2.29
APOEP02649 AP001893.2-201ENST00000526949 202 ntBASIC0.72□□□□□ -2.29
APOEP02649 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC0.72□□□□□ -2.29
APOEP02649 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.72□□□□□ -2.29
APOEP02649 MIR5697-201ENST00000578045 78 ntBASIC0.72□□□□□ -2.29
APOEP02649 AC073539.2-201ENST00000597113 165 ntBASIC0.72□□□□□ -2.29
APOEP02649 CTHRC1P1-201ENST00000605383 469 ntBASIC0.72□□□□□ -2.29
APOEP02649 AC008945.2-201ENST00000606056 604 ntBASIC0.72□□□□□ -2.29
APOEP02649 AC008147.4-201ENST00000617570 1204 ntBASIC0.72□□□□□ -2.29
APOEP02649 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.72□□□□□ -2.29
APOEP02649 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
APOEP02649 RNU6-692P-201ENST00000384496 107 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms