Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC2.13□□□□□ -2.07
SIX3O95343 RPL23AP42-201ENST00000471152 471 ntBASIC2.13□□□□□ -2.07
SIX3O95343 PTP4A1P4-201ENST00000512479 322 ntBASIC2.13□□□□□ -2.07
SIX3O95343 RNU6-567P-201ENST00000516746 107 ntBASIC2.13□□□□□ -2.07
SIX3O95343 SNORA31.16-201ENST00000516773 139 ntBASIC2.13□□□□□ -2.07
SIX3O95343 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.13□□□□□ -2.07
SIX3O95343 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.13□□□□□ -2.07
SIX3O95343 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.13□□□□□ -2.07
SIX3O95343 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.13□□□□□ -2.07
SIX3O95343 HMGB1P33-201ENST00000563485 527 ntBASIC2.13□□□□□ -2.07
SIX3O95343 MIR5002-201ENST00000584713 97 ntBASIC2.13□□□□□ -2.07
SIX3O95343 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
SIX3O95343 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.13□□□□□ -2.07
SIX3O95343 OR4G1P-203ENST00000641984 1631 ntBASIC2.13□□□□□ -2.07
SIX3O95343 RNU6-623P-201ENST00000363143 105 ntBASIC2.12□□□□□ -2.07
SIX3O95343 Y_RNA.112-201ENST00000363250 102 ntBASIC2.12□□□□□ -2.07
SIX3O95343 Y_RNA.373-201ENST00000365600 103 ntBASIC2.12□□□□□ -2.07
SIX3O95343 RNU4-20P-201ENST00000365601 151 ntBASIC2.12□□□□□ -2.07
SIX3O95343 RNU6-933P-201ENST00000384424 107 ntBASIC2.12□□□□□ -2.07
SIX3O95343 EIF4E2P1-201ENST00000393781 255 ntBASIC2.12□□□□□ -2.07
SIX3O95343 AL357139.1-201ENST00000407792 426 ntBASIC2.12□□□□□ -2.07
SIX3O95343 RN7SKP61-201ENST00000410642 295 ntBASIC2.12□□□□□ -2.07
SIX3O95343 RNU6-1068P-201ENST00000410958 103 ntBASIC2.12□□□□□ -2.07
SIX3O95343 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SIX3O95343 WARS2P1-201ENST00000429678 537 ntBASIC2.12□□□□□ -2.07
SIX3O95343 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.12□□□□□ -2.07
SIX3O95343 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.12□□□□□ -2.07
SIX3O95343 AL031659.1-201ENST00000447075 539 ntBASIC2.12□□□□□ -2.07
SIX3O95343 AC104564.1-201ENST00000493028 407 ntBASIC2.12□□□□□ -2.07
SIX3O95343 AC008628.2-201ENST00000502605 298 ntBASIC2.12□□□□□ -2.07
SIX3O95343 RPL39P5-202ENST00000512505 151 ntBASIC2.12□□□□□ -2.07
SIX3O95343 RNU6-835P-201ENST00000516974 104 ntBASIC2.12□□□□□ -2.07
SIX3O95343 AP005660.1-201ENST00000522972 293 ntBASIC2.12□□□□□ -2.07
SIX3O95343 AC018630.3-201ENST00000542637 96 ntBASIC2.12□□□□□ -2.07
SIX3O95343 AL118558.2-201ENST00000556294 238 ntBASIC2.12□□□□□ -2.07
SIX3O95343 DISC2.1-201ENST00000612827 205 ntBASIC2.12□□□□□ -2.07
SIX3O95343 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.12□□□□□ -2.07
SIX3O95343 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.12□□□□□ -2.07
SIX3O95343 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.12□□□□□ -2.07
SIX3O95343 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
SIX3O95343 MTND5P6-201ENST00000422338 1798 ntBASIC2.12□□□□□ -2.07
SIX3O95343 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.12□□□□□ -2.07
SIX3O95343 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.11□□□□□ -2.07
SIX3O95343 RNA5SP276-201ENST00000362580 94 ntBASIC2.11□□□□□ -2.07
SIX3O95343 RNU4-15P-201ENST00000362613 141 ntBASIC2.11□□□□□ -2.07
SIX3O95343 Y_RNA.231-201ENST00000364358 102 ntBASIC2.11□□□□□ -2.07
SIX3O95343 RNU6-483P-201ENST00000384088 108 ntBASIC2.11□□□□□ -2.07
SIX3O95343 SNORD14D-201ENST00000384390 87 ntBASIC2.11□□□□□ -2.07
SIX3O95343 MIR518A2-201ENST00000384966 87 ntBASIC2.11□□□□□ -2.07
SIX3O95343 RNU6-780P-201ENST00000391030 104 ntBASIC2.11□□□□□ -2.07
SIX3O95343 SNORA46.1-201ENST00000391069 153 ntBASIC2.11□□□□□ -2.07
SIX3O95343 SRIP3-201ENST00000413200 219 ntBASIC2.11□□□□□ -2.07
SIX3O95343 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.11□□□□□ -2.07
SIX3O95343 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.11□□□□□ -2.07
SIX3O95343 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.11□□□□□ -2.07
SIX3O95343 DPH3P2-201ENST00000422618 250 ntBASIC2.11□□□□□ -2.07
SIX3O95343 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.11□□□□□ -2.07
SIX3O95343 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.11□□□□□ -2.07
SIX3O95343 RNU6-1208P-201ENST00000459588 107 ntBASIC2.11□□□□□ -2.07
SIX3O95343 RPL9P9-202ENST00000466501 579 ntBASIC2.11□□□□□ -2.07
SIX3O95343 RNU6-612P-201ENST00000516909 102 ntBASIC2.11□□□□□ -2.07
SIX3O95343 AC121758.2-201ENST00000553271 193 ntBASIC2.11□□□□□ -2.07
SIX3O95343 AC021231.3-201ENST00000558497 370 ntBASIC2.11□□□□□ -2.07
SIX3O95343 snoU13.31-201ENST00000607291 104 ntBASIC2.11□□□□□ -2.07
SIX3O95343 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
SIX3O95343 SNORA16B-201ENST00000364674 135 ntBASIC2.1□□□□□ -2.07
SIX3O95343 SNORD32A-201ENST00000364805 84 ntBASIC2.1□□□□□ -2.07
SIX3O95343 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
SIX3O95343 MIR144-201ENST00000384886 86 ntBASIC2.1□□□□□ -2.07
SIX3O95343 MIR17-201ENST00000385012 84 ntBASIC2.1□□□□□ -2.07
SIX3O95343 RNU6-648P-201ENST00000410190 107 ntBASIC2.1□□□□□ -2.07
SIX3O95343 AP000275.1-201ENST00000411943 390 ntBASIC2.1□□□□□ -2.07
SIX3O95343 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.1□□□□□ -2.07
SIX3O95343 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.1□□□□□ -2.07
SIX3O95343 MTND3P9-201ENST00000429526 346 ntBASIC2.1□□□□□ -2.07
SIX3O95343 AL133396.1-201ENST00000432048 687 ntBASIC2.1□□□□□ -2.07
SIX3O95343 ERLEC1P1-201ENST00000433806 578 ntBASIC2.1□□□□□ -2.07
SIX3O95343 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC2.1□□□□□ -2.07
SIX3O95343 PMCHL2-203ENST00000457791 237 ntBASIC2.1□□□□□ -2.07
SIX3O95343 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.1□□□□□ -2.07
SIX3O95343 AC114801.2-201ENST00000503825 781 ntBASIC2.1□□□□□ -2.07
SIX3O95343 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.1□□□□□ -2.07
SIX3O95343 RNA5SP200-201ENST00000516360 103 ntBASIC2.1□□□□□ -2.07
SIX3O95343 RNU6-1069P-201ENST00000516612 133 ntBASIC2.1□□□□□ -2.07
SIX3O95343 RNU6-1332P-201ENST00000516666 104 ntBASIC2.1□□□□□ -2.07
SIX3O95343 IGLV3-17-201ENST00000519099 244 ntBASIC2.1□□□□□ -2.07
SIX3O95343 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC2.1□□□□□ -2.07
SIX3O95343 MIR5692C1-201ENST00000585309 91 ntBASIC2.1□□□□□ -2.07
SIX3O95343 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC2.1□□□□□ -2.07
SIX3O95343 AL132822.1-201ENST00000617063 513 ntBASIC2.1□□□□□ -2.07
SIX3O95343 AC130454.1-201ENST00000622948 401 ntBASIC2.1□□□□□ -2.07
SIX3O95343 MIR1248-201ENST00000629190 106 ntBASIC2.1□□□□□ -2.07
SIX3O95343 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.09□□□□□ -2.07
SIX3O95343 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
SIX3O95343 ZNF702P-202ENST00000434269 1966 ntBASIC2.09□□□□□ -2.07
SIX3O95343 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
SIX3O95343 RNY1P10-201ENST00000363268 113 ntBASIC2.09□□□□□ -2.07
SIX3O95343 U3.9-201ENST00000363823 204 ntBASIC2.09□□□□□ -2.07
SIX3O95343 RNU6-26P-201ENST00000383985 107 ntBASIC2.09□□□□□ -2.07
SIX3O95343 RNU11-3P-201ENST00000391111 133 ntBASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms