Protein–RNA interactions for Protein: O60341

KDM1A, Lysine-specific histone demethylase 1A, humanhuman

Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1AO60341 MIR4276-201ENST00000584832 70 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 MIR3922-201ENST00000585192 84 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.29□□□□□ -1.88
KDM1AO60341 AL034555.1-201ENST00000604816 211 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 UCA1.1-201ENST00000620952 75 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.29□□□□□ -1.88
KDM1AO60341 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.29□□□□□ -1.88
KDM1AO60341 Z75746.1-201ENST00000440243 2080 ntBASIC3.29□□□□□ -1.88
KDM1AO60341 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
KDM1AO60341 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
KDM1AO60341 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KDM1AO60341 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
KDM1AO60341 Y_RNA.47-201ENST00000362697 108 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 RNU6-1159P-201ENST00000362933 107 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 RNU6-1083P-201ENST00000384022 107 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 RNU6-708P-201ENST00000384217 107 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 RNY3P4-201ENST00000384428 101 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 RNU1-57P-201ENST00000384491 166 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 RNU6-541P-201ENST00000384709 110 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 MIR183-201ENST00000384958 110 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 MIR568-201ENST00000385036 95 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 U3.26-201ENST00000391236 204 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 SNORA11-201ENST00000408789 128 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
KDM1AO60341 AL356968.1-201ENST00000416622 474 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.28□□□□□ -1.88
KDM1AO60341 AC073910.1-201ENST00000445047 438 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 AP000705.1-201ENST00000454567 350 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 HMGN1P18-201ENST00000457642 277 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.28□□□□□ -1.88
KDM1AO60341 RN7SL601P-201ENST00000471221 293 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC3.28□□□□□ -1.88
KDM1AO60341 MRPS36P2-201ENST00000512569 299 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 IGKV2-26-201ENST00000518305 343 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.28□□□□□ -1.88
KDM1AO60341 AP002404.1-201ENST00000532005 451 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.28□□□□□ -1.88
KDM1AO60341 CYP4A27P-201ENST00000567218 190 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.28□□□□□ -1.88
KDM1AO60341 AC011471.1-201ENST00000585766 187 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.28□□□□□ -1.88
KDM1AO60341 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.28□□□□□ -1.88
KDM1AO60341 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC3.28□□□□□ -1.88
KDM1AO60341 AL138963.2-201ENST00000605137 226 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 AC073657.2-201ENST00000605661 303 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.28□□□□□ -1.88
KDM1AO60341 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
KDM1AO60341 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
KDM1AO60341 AL359854.1-201ENST00000614203 1594 ntBASIC3.28□□□□□ -1.88
KDM1AO60341 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
KDM1AO60341 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
KDM1AO60341 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.27□□□□□ -1.89
KDM1AO60341 RNU6-655P-201ENST00000362858 107 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 RNU6-137P-201ENST00000363680 108 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 SNORD115-8-201ENST00000363856 82 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 Y_RNA.276-201ENST00000364732 109 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 SNORA51.4-201ENST00000364993 124 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 SNORD115-38-201ENST00000365037 82 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 MIR34B-201ENST00000385076 84 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 MIR1302-3-201ENST00000408128 138 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 AIMP1P2-201ENST00000425294 312 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 AC244505.4-201ENST00000434905 287 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.27□□□□□ -1.89
KDM1AO60341 SSXP5-201ENST00000443473 287 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.27□□□□□ -1.89
KDM1AO60341 AC022868.1-201ENST00000517767 391 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.27□□□□□ -1.89
KDM1AO60341 COX6CP5-201ENST00000527162 228 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 AC090517.1-201ENST00000569307 266 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.27□□□□□ -1.89
KDM1AO60341 RAC1P9-201ENST00000604990 392 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 MIR7975-201ENST00000619350 68 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 U6.105-201ENST00000637379 88 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
KDM1AO60341 AP003122.5-201ENST00000527668 3766 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.27□□□□□ -1.89
KDM1AO60341 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
KDM1AO60341 AL356274.2-201ENST00000624379 3752 ntBASIC3.27□□□□□ -1.89
KDM1AO60341 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
KDM1AO60341 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.26□□□□□ -1.89
KDM1AO60341 RNU6-1210P-201ENST00000363775 107 ntBASIC3.26□□□□□ -1.89
KDM1AO60341 Y_RNA.471-201ENST00000384312 102 ntBASIC3.26□□□□□ -1.89
KDM1AO60341 MIR487A-201ENST00000385009 80 ntBASIC3.26□□□□□ -1.89
KDM1AO60341 RNU6-1109P-201ENST00000391187 107 ntBASIC3.26□□□□□ -1.89
KDM1AO60341 AC093578.1-201ENST00000415219 368 ntBASIC3.26□□□□□ -1.89
KDM1AO60341 AL139281.1-201ENST00000422120 335 ntBASIC3.26□□□□□ -1.89
KDM1AO60341 SDAD1P3-201ENST00000427380 333 ntBASIC3.26□□□□□ -1.89
KDM1AO60341 EIF1P2-201ENST00000428233 350 ntBASIC3.26□□□□□ -1.89
KDM1AO60341 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.26□□□□□ -1.89
KDM1AO60341 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.26□□□□□ -1.89
KDM1AO60341 RPEP5-201ENST00000441137 268 ntBASIC3.26□□□□□ -1.89
KDM1AO60341 AL121594.1-201ENST00000475906 575 ntBASIC3.26□□□□□ -1.89
KDM1AO60341 RNU6-1198P-201ENST00000516904 67 ntBASIC3.26□□□□□ -1.89
KDM1AO60341 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.26□□□□□ -1.89
KDM1AO60341 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC3.26□□□□□ -1.89
KDM1AO60341 U6.92-201ENST00000636464 89 ntBASIC3.26□□□□□ -1.89
KDM1AO60341 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
KDM1AO60341 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms