Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 Y_RNA.496-201ENST00000384444 101 ntBASIC2.65□□□□□ -1.99
LDB2O43679 Y_RNA.577-201ENST00000384794 101 ntBASIC2.65□□□□□ -1.99
LDB2O43679 MIR196B-201ENST00000384852 84 ntBASIC2.65□□□□□ -1.99
LDB2O43679 MIR767-201ENST00000390228 109 ntBASIC2.65□□□□□ -1.99
LDB2O43679 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.65□□□□□ -1.99
LDB2O43679 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.65□□□□□ -1.99
LDB2O43679 MTND4P19-201ENST00000446659 478 ntBASIC2.65□□□□□ -1.99
LDB2O43679 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.65□□□□□ -1.99
LDB2O43679 RNU5B-3P-201ENST00000516601 115 ntBASIC2.65□□□□□ -1.99
LDB2O43679 AC023442.1-201ENST00000531247 422 ntBASIC2.65□□□□□ -1.99
LDB2O43679 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.65□□□□□ -1.99
LDB2O43679 MIR5701-3-201ENST00000578890 82 ntBASIC2.65□□□□□ -1.99
LDB2O43679 AC090897.2-201ENST00000581715 130 ntBASIC2.65□□□□□ -1.99
LDB2O43679 MIR5701-1-201ENST00000585138 82 ntBASIC2.65□□□□□ -1.99
LDB2O43679 AL391813.1-201ENST00000603098 260 ntBASIC2.65□□□□□ -1.99
LDB2O43679 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.65□□□□□ -1.99
LDB2O43679 AC083806.3-201ENST00000614016 455 ntBASIC2.65□□□□□ -1.99
LDB2O43679 MIR5701-2-201ENST00000615634 82 ntBASIC2.65□□□□□ -1.99
LDB2O43679 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LDB2O43679 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.65□□□□□ -1.99
LDB2O43679 SNORD21-201ENST00000383953 95 ntBASIC2.64□□□□□ -1.99
LDB2O43679 RNU6-639P-201ENST00000384074 107 ntBASIC2.64□□□□□ -1.99
LDB2O43679 RNU6-1032P-201ENST00000384100 107 ntBASIC2.64□□□□□ -1.99
LDB2O43679 RNY1P14-201ENST00000384426 108 ntBASIC2.64□□□□□ -1.99
LDB2O43679 MIR606-201ENST00000384851 96 ntBASIC2.64□□□□□ -1.99
LDB2O43679 MIR544A-201ENST00000384855 91 ntBASIC2.64□□□□□ -1.99
LDB2O43679 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
LDB2O43679 RNU2-52P-201ENST00000410680 190 ntBASIC2.64□□□□□ -1.99
LDB2O43679 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.64□□□□□ -1.99
LDB2O43679 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.64□□□□□ -1.99
LDB2O43679 EIF1AXP1-201ENST00000419267 435 ntBASIC2.64□□□□□ -1.99
LDB2O43679 MRPS18CP6-201ENST00000423587 223 ntBASIC2.64□□□□□ -1.99
LDB2O43679 RPL23AP95-201ENST00000426806 265 ntBASIC2.64□□□□□ -1.99
LDB2O43679 AC063976.3-201ENST00000426849 329 ntBASIC2.64□□□□□ -1.99
LDB2O43679 Z96811.1-201ENST00000445880 108 ntBASIC2.64□□□□□ -1.99
LDB2O43679 AL513124.1-201ENST00000450410 614 ntBASIC2.64□□□□□ -1.99
LDB2O43679 AL441985.1-201ENST00000457727 251 ntBASIC2.64□□□□□ -1.99
LDB2O43679 SNORD109B-201ENST00000458961 67 ntBASIC2.64□□□□□ -1.99
LDB2O43679 SNORD109A-201ENST00000459128 67 ntBASIC2.64□□□□□ -1.99
LDB2O43679 RPL30P10-201ENST00000488148 337 ntBASIC2.64□□□□□ -1.99
LDB2O43679 RAC1P5-201ENST00000512182 576 ntBASIC2.64□□□□□ -1.99
LDB2O43679 SNORA25.10-201ENST00000515926 124 ntBASIC2.64□□□□□ -1.99
LDB2O43679 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.64□□□□□ -1.99
LDB2O43679 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.64□□□□□ -1.99
LDB2O43679 AC060766.3-201ENST00000591442 263 ntBASIC2.64□□□□□ -1.99
LDB2O43679 AL360085.1-201ENST00000604713 532 ntBASIC2.64□□□□□ -1.99
LDB2O43679 RNU6-91P-201ENST00000607774 107 ntBASIC2.64□□□□□ -1.99
LDB2O43679 AC006157.1-201ENST00000611750 366 ntBASIC2.64□□□□□ -1.99
LDB2O43679 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
LDB2O43679 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
LDB2O43679 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
LDB2O43679 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.63□□□□□ -1.99
LDB2O43679 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.63□□□□□ -1.99
LDB2O43679 AC062016.1-201ENST00000355719 319 ntBASIC2.63□□□□□ -1.99
LDB2O43679 RNU6-99P-201ENST00000364721 107 ntBASIC2.63□□□□□ -1.99
LDB2O43679 RNU6-1160P-201ENST00000384546 104 ntBASIC2.63□□□□□ -1.99
LDB2O43679 RNU6-1222P-201ENST00000384615 107 ntBASIC2.63□□□□□ -1.99
LDB2O43679 MIR147B-201ENST00000390185 80 ntBASIC2.63□□□□□ -1.99
LDB2O43679 RNA5SP354-201ENST00000391247 136 ntBASIC2.63□□□□□ -1.99
LDB2O43679 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.63□□□□□ -1.99
LDB2O43679 AC108938.1-201ENST00000451204 136 ntBASIC2.63□□□□□ -1.99
LDB2O43679 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.63□□□□□ -1.99
LDB2O43679 AC091874.1-201ENST00000511402 339 ntBASIC2.63□□□□□ -1.99
LDB2O43679 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.63□□□□□ -1.99
LDB2O43679 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.63□□□□□ -1.99
LDB2O43679 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.63□□□□□ -1.99
LDB2O43679 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.63□□□□□ -1.99
LDB2O43679 AC004584.2-201ENST00000570407 410 ntBASIC2.63□□□□□ -1.99
LDB2O43679 AL355802.3-201ENST00000607571 545 ntBASIC2.63□□□□□ -1.99
LDB2O43679 AC007485.1-201ENST00000616755 206 ntBASIC2.63□□□□□ -1.99
LDB2O43679 AC002064.3-201ENST00000623448 346 ntBASIC2.63□□□□□ -1.99
LDB2O43679 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
LDB2O43679 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.63□□□□□ -1.99
LDB2O43679 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LDB2O43679 AC138915.1-201ENST00000565427 1685 ntBASIC2.63□□□□□ -1.99
LDB2O43679 AC002543.1-201ENST00000299783 1954 ntBASIC2.62□□□□□ -1.99
LDB2O43679 RNU6-1141P-201ENST00000364520 107 ntBASIC2.62□□□□□ -1.99
LDB2O43679 Y_RNA.364-201ENST00000365532 101 ntBASIC2.62□□□□□ -1.99
LDB2O43679 RNU6-968P-201ENST00000384076 107 ntBASIC2.62□□□□□ -1.99
LDB2O43679 RNU6-738P-201ENST00000384531 106 ntBASIC2.62□□□□□ -1.99
LDB2O43679 RNU6-700P-201ENST00000391043 107 ntBASIC2.62□□□□□ -1.99
LDB2O43679 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.62□□□□□ -1.99
LDB2O43679 MTND2P23-201ENST00000422990 651 ntBASIC2.62□□□□□ -1.99
LDB2O43679 MTCYBP10-201ENST00000424905 650 ntBASIC2.62□□□□□ -1.99
LDB2O43679 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LDB2O43679 ARL5AP4-201ENST00000430731 512 ntBASIC2.62□□□□□ -1.99
LDB2O43679 AC004383.1-201ENST00000438135 289 ntBASIC2.62□□□□□ -1.99
LDB2O43679 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC2.62□□□□□ -1.99
LDB2O43679 AL109933.2-201ENST00000452651 260 ntBASIC2.62□□□□□ -1.99
LDB2O43679 RN7SKP210-201ENST00000459176 261 ntBASIC2.62□□□□□ -1.99
LDB2O43679 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.62□□□□□ -1.99
LDB2O43679 GZMAP1-201ENST00000503054 631 ntBASIC2.62□□□□□ -1.99
LDB2O43679 AC105758.1-201ENST00000506038 399 ntBASIC2.62□□□□□ -1.99
LDB2O43679 RNU6-327P-201ENST00000516270 127 ntBASIC2.62□□□□□ -1.99
LDB2O43679 RNA5SP282-201ENST00000516355 108 ntBASIC2.62□□□□□ -1.99
LDB2O43679 RNU7-4P-201ENST00000516961 62 ntBASIC2.62□□□□□ -1.99
LDB2O43679 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.62□□□□□ -1.99
LDB2O43679 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LDB2O43679 AL590705.4-201ENST00000532209 134 ntBASIC2.62□□□□□ -1.99
LDB2O43679 AC016256.1-201ENST00000547971 354 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms