Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SNORD60.2-201ENST00000516883 86 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 SCARNA3-201ENST00000517097 143 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 MTND1P5-201ENST00000517906 940 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 ZNF519P2-201ENST00000557032 169 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC007229.1-201ENST00000590455 412 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC021646.1-201ENST00000605469 484 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC012557.2-201ENST00000605919 418 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC092807.2-201ENST00000609367 243 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 FAM157A-202ENST00000615155 405 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL159153.1-201ENST00000619688 317 ntBASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.69□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC121333.1-201ENST00000567488 2709 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 HAUS6P2-201ENST00000433254 2404 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.6-201ENST00000362350 114 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-428P-201ENST00000362942 107 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.89-201ENST00000363031 102 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-105P-201ENST00000363909 104 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.231-201ENST00000364358 102 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU4-66P-201ENST00000365199 138 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.402-201ENST00000383972 102 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNA5SP219-201ENST00000390940 113 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 RPS29P13-201ENST00000402041 169 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 U6atac.2-201ENST00000408644 118 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.615-201ENST00000410769 117 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 OR9R1P-201ENST00000412200 877 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC097463.2-201ENST00000421074 142 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 RPL31P63-201ENST00000422565 375 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 EIF4EP4-201ENST00000424916 578 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC008267.5-201ENST00000424928 265 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 HMGB1P31-201ENST00000437242 427 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 SEPT14P3-201ENST00000439401 183 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL732372.2-207ENST00000445840 183 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 SEPT14P2-201ENST00000453405 183 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU7-66P-201ENST00000459469 62 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC080013.2-201ENST00000460866 323 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 SEPT14P4-201ENST00000513445 186 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 SNORA25.11-201ENST00000515935 105 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.665-201ENST00000516177 98 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU7-193P-201ENST00000516723 65 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 FO082796.1-201ENST00000523795 183 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 AP005597.4-201ENST00000526762 229 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC109635.3-201ENST00000529536 185 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR5692C1-201ENST00000585309 91 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 OR4G1P-203ENST00000641984 1631 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 MTND4P27-201ENST00000450813 1354 ntBASIC1.68□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.9-201ENST00000362354 101 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-1010P-201ENST00000362757 107 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNY1P10-201ENST00000363268 113 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 SNORA16B-201ENST00000364674 135 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-336P-201ENST00000364891 107 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-234P-201ENST00000365229 104 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 U8.10-201ENST00000384260 133 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR218-1-201ENST00000384999 110 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR147B-201ENST00000390185 80 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 SNORA17.3-201ENST00000391159 129 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 SNORD115-47-201ENST00000391226 86 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 BTF3P4-201ENST00000418852 495 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC243964.1-201ENST00000441814 261 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC112771.1-201ENST00000463581 102 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 RPL36AP48-201ENST00000485521 314 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 Y_RNA.654-201ENST00000497848 106 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 SMURF2P1-201ENST00000514992 481 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-189P-201ENST00000516120 101 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 CYCSP27-201ENST00000527643 293 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC010186.2-204ENST00000537668 439 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR4419B-201ENST00000577260 68 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC024614.2-201ENST00000577584 372 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR3199-1-201ENST00000582434 88 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR4765-201ENST00000585007 77 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 AP003465.2-201ENST00000602571 373 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 CTHRC1P1-201ENST00000605383 469 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 Z82243.1-201ENST00000609432 473 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL512598.1-201ENST00000610158 273 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 U2.17-201ENST00000611454 95 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 DISC2.1-201ENST00000612827 205 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 MIR3529-201ENST00000637713 78 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 Z75746.1-201ENST00000440243 2080 ntBASIC1.67□□□□□ -2.14
TMX2-CTNND1H3BSU7 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU6-858P-201ENST00000362436 107 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNU4-12P-201ENST00000365233 139 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 SNORD73A-201ENST00000386062 65 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 AL512604.1-201ENST00000404812 257 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNA5SP390-201ENST00000410191 113 ntBASIC1.66□□□□□ -2.14
TMX2-CTNND1H3BSU7 RNA5SP270-201ENST00000411361 118 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 170.8 ms