Protein–RNA interactions for Protein: H3BM21

Integrin beta (Fragment), humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3BM21 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.34□□□□□ -1.71
H3BM21 AC009237.10-201ENST00000414112 510 ntBASIC4.34□□□□□ -1.71
H3BM21 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.34□□□□□ -1.71
H3BM21 AC244670.1-201ENST00000436879 112 ntBASIC4.34□□□□□ -1.71
H3BM21 MTATP6P21-201ENST00000440681 189 ntBASIC4.34□□□□□ -1.71
H3BM21 RNU6-893P-201ENST00000458841 100 ntBASIC4.34□□□□□ -1.71
H3BM21 COX6CP6-201ENST00000490840 228 ntBASIC4.34□□□□□ -1.71
H3BM21 RNU6-857P-201ENST00000515893 110 ntBASIC4.34□□□□□ -1.71
H3BM21 RNU6-1299P-201ENST00000516316 100 ntBASIC4.34□□□□□ -1.71
H3BM21 AC141557.1-201ENST00000540982 400 ntBASIC4.34□□□□□ -1.71
H3BM21 AC079587.1-201ENST00000603846 277 ntBASIC4.34□□□□□ -1.71
H3BM21 AC007546.2-201ENST00000623996 360 ntBASIC4.34□□□□□ -1.71
H3BM21 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
H3BM21 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.34□□□□□ -1.72
H3BM21 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.34□□□□□ -1.72
H3BM21 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3BM21 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.33□□□□□ -1.72
H3BM21 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3BM21 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3BM21 IL33-202ENST00000417746 2327 ntTSL 2 BASIC4.33□□□□□ -1.72
H3BM21 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
H3BM21 MIR302B-201ENST00000362188 73 ntBASIC4.33□□□□□ -1.72
H3BM21 MIR331-201ENST00000362302 94 ntBASIC4.33□□□□□ -1.72
H3BM21 RNA5SP388-201ENST00000362584 119 ntBASIC4.33□□□□□ -1.72
H3BM21 RNA5SP307-201ENST00000362863 116 ntBASIC4.33□□□□□ -1.72
H3BM21 Y_RNA.78-201ENST00000362970 110 ntBASIC4.33□□□□□ -1.72
H3BM21 RNU1-20P-201ENST00000363314 162 ntBASIC4.33□□□□□ -1.72
H3BM21 Y_RNA.361-201ENST00000365515 120 ntBASIC4.33□□□□□ -1.72
H3BM21 Z98749.2-208ENST00000381646 500 ntBASIC4.33□□□□□ -1.72
H3BM21 HDGFP1-201ENST00000405943 252 ntBASIC4.33□□□□□ -1.72
H3BM21 RN7SKP101-201ENST00000411376 320 ntBASIC4.33□□□□□ -1.72
H3BM21 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.33□□□□□ -1.72
H3BM21 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.33□□□□□ -1.72
H3BM21 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.33□□□□□ -1.72
H3BM21 RPL23AP14-201ENST00000468281 468 ntBASIC4.33□□□□□ -1.72
H3BM21 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.33□□□□□ -1.72
H3BM21 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.33□□□□□ -1.72
H3BM21 AC026402.1-201ENST00000513642 170 ntBASIC4.33□□□□□ -1.72
H3BM21 CYCSP29-201ENST00000533731 318 ntBASIC4.33□□□□□ -1.72
H3BM21 MIR6891-201ENST00000618788 93 ntBASIC4.33□□□□□ -1.72
H3BM21 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
H3BM21 AC073073.2-201ENST00000609827 2578 ntBASIC4.33□□□□□ -1.72
H3BM21 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.32□□□□□ -1.72
H3BM21 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
H3BM21 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3BM21 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
H3BM21 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3BM21 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC4.32□□□□□ -1.72
H3BM21 AC022893.2-201ENST00000564832 3296 ntBASIC4.32□□□□□ -1.72
H3BM21 RNU6-787P-201ENST00000384032 107 ntBASIC4.32□□□□□ -1.72
H3BM21 MIR518D-201ENST00000385014 87 ntBASIC4.32□□□□□ -1.72
H3BM21 RNA5SP372-201ENST00000390836 115 ntBASIC4.32□□□□□ -1.72
H3BM21 SNORA74C-2-201ENST00000411179 201 ntBASIC4.32□□□□□ -1.72
H3BM21 CYP4F29P-201ENST00000420685 446 ntBASIC4.32□□□□□ -1.72
H3BM21 AC005300.1-201ENST00000428401 373 ntBASIC4.32□□□□□ -1.72
H3BM21 AL356867.1-201ENST00000429623 299 ntBASIC4.32□□□□□ -1.72
H3BM21 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.32□□□□□ -1.72
H3BM21 AL358232.1-201ENST00000448030 501 ntBASIC4.32□□□□□ -1.72
H3BM21 AC091826.1-201ENST00000514065 313 ntBASIC4.32□□□□□ -1.72
H3BM21 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.32□□□□□ -1.72
H3BM21 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.32□□□□□ -1.72
H3BM21 TVP23BP1-201ENST00000557500 617 ntBASIC4.32□□□□□ -1.72
H3BM21 AC019288.1-201ENST00000557918 224 ntBASIC4.32□□□□□ -1.72
H3BM21 AL160290.3-201ENST00000604869 165 ntBASIC4.32□□□□□ -1.72
H3BM21 IGLL4P-201ENST00000614590 133 ntBASIC4.32□□□□□ -1.72
H3BM21 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.32□□□□□ -1.72
H3BM21 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
H3BM21 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.32□□□□□ -1.72
H3BM21 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
H3BM21 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.32□□□□□ -1.72
H3BM21 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
H3BM21 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
H3BM21 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.31□□□□□ -1.72
H3BM21 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.31□□□□□ -1.72
H3BM21 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.31□□□□□ -1.72
H3BM21 Y_RNA.73-201ENST00000362910 113 ntBASIC4.31□□□□□ -1.72
H3BM21 Y_RNA.93-201ENST00000363066 109 ntBASIC4.31□□□□□ -1.72
H3BM21 RNA5SP515-201ENST00000364570 118 ntBASIC4.31□□□□□ -1.72
H3BM21 SNORD87-201ENST00000364849 89 ntBASIC4.31□□□□□ -1.72
H3BM21 RNU6-837P-201ENST00000391056 108 ntBASIC4.31□□□□□ -1.72
H3BM21 RNA5SP496-201ENST00000391240 109 ntBASIC4.31□□□□□ -1.72
H3BM21 MIR891A-201ENST00000401237 79 ntBASIC4.31□□□□□ -1.72
H3BM21 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC4.31□□□□□ -1.72
H3BM21 AC079780.1-201ENST00000428259 207 ntBASIC4.31□□□□□ -1.72
H3BM21 KC877373.1-201ENST00000479066 408 ntBASIC4.31□□□□□ -1.72
H3BM21 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.31□□□□□ -1.72
H3BM21 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.31□□□□□ -1.72
H3BM21 AC108145.1-201ENST00000503770 153 ntBASIC4.31□□□□□ -1.72
H3BM21 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC4.31□□□□□ -1.72
H3BM21 SNORA70.12-201ENST00000516084 153 ntBASIC4.31□□□□□ -1.72
H3BM21 RNU6-904P-201ENST00000516206 101 ntBASIC4.31□□□□□ -1.72
H3BM21 SNORA18.4-201ENST00000516440 124 ntBASIC4.31□□□□□ -1.72
H3BM21 RNU6-1183P-201ENST00000517054 60 ntBASIC4.31□□□□□ -1.72
H3BM21 RNU6-365P-201ENST00000517113 106 ntBASIC4.31□□□□□ -1.72
H3BM21 LINC00933-203ENST00000559812 219 ntBASIC4.31□□□□□ -1.72
H3BM21 MIR5009-201ENST00000578736 100 ntBASIC4.31□□□□□ -1.72
H3BM21 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.31□□□□□ -1.72
H3BM21 AL138880.2-201ENST00000616214 239 ntBASIC4.31□□□□□ -1.72
H3BM21 AC006065.5-201ENST00000623427 349 ntBASIC4.31□□□□□ -1.72
H3BM21 U6.115-201ENST00000636045 103 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms