Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 AL590705.4-201ENST00000532209 134 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 HSPE1P4-201ENST00000550617 308 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AC133485.1-201ENST00000567176 124 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AC138907.6-201ENST00000568401 126 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 MIR5692A1-201ENST00000580523 69 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AC008752.3-201ENST00000588113 712 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 RPL17P51-201ENST00000605218 238 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AL353149.1-201ENST00000610667 244 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AC012409.4-201ENST00000612923 249 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 uc_338.17-201ENST00000619633 179 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 AP002782.1-201ENST00000623107 614 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 U4.7-201ENST00000638126 106 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 OR4G1P-203ENST00000641984 1631 ntBASIC0.45□□□□□ -2.34
TRAV4A0A0B4J268 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-1141P-201ENST00000364520 107 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 RNY4P16-201ENST00000364768 94 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-534P-201ENST00000364877 106 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-877P-201ENST00000383868 107 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-17P-201ENST00000384245 107 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 Y_RNA.465-201ENST00000384293 102 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 Y_RNA.472-201ENST00000384322 102 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 SNORD116-12-201ENST00000384468 92 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-110P-201ENST00000384508 104 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-18P-201ENST00000384527 107 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 MIR92A1-201ENST00000385233 78 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 RNA5SP201-201ENST00000410316 124 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AL049829.1-201ENST00000465411 156 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 HMGN1P12-201ENST00000499125 195 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AC011406.1-201ENST00000512440 370 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 SNORD79.1-201ENST00000516069 84 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 RNA5SP384-201ENST00000516615 116 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AC123904.2-201ENST00000548059 300 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AC021231.3-201ENST00000558497 370 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 BNIP3P16-201ENST00000589779 534 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AC136443.5-201ENST00000603741 370 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AC105148.1-201ENST00000604961 409 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AL139286.2-201ENST00000606838 396 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AP002360.4-201ENST00000606980 481 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AC104465.1-201ENST00000611365 139 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 AC099786.3-201ENST00000565735 1410 ntBASIC0.44□□□□□ -2.34
TRAV4A0A0B4J268 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-371P-201ENST00000364283 108 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 MIR605-201ENST00000385078 83 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 MIR942-201ENST00000401111 86 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 AL136310.1-201ENST00000404926 654 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 AL031779.1-201ENST00000415663 330 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 MTND1P32-201ENST00000433043 938 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 AC243964.1-201ENST00000441814 261 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 SNRPGP7-201ENST00000469016 106 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 AC048334.1-201ENST00000477975 159 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 AP000797.1-201ENST00000478870 387 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 COX6CP6-201ENST00000490840 228 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 AC010587.2-201ENST00000511727 448 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-123P-201ENST00000516163 102 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-201P-201ENST00000517100 61 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 ZNF321P-202ENST00000550843 495 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 CYP3A137P-201ENST00000562436 69 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 FAM106DP-201ENST00000586416 501 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 AC121334.2-201ENST00000605387 271 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 AL121895.2-201ENST00000619558 447 ntBASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC0.43□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-105P-201ENST00000363909 104 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-950P-201ENST00000384651 107 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 MIR520E-201ENST00000384867 87 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 ERHP2-201ENST00000402323 299 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 RPL22P18-201ENST00000417197 377 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 C1DP2-201ENST00000418167 426 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 AC060773.1-201ENST00000421698 310 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 AL353777.1-201ENST00000425552 326 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 SNRPFP3-201ENST00000457792 225 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 BET1P1-201ENST00000482276 359 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 RNU4-54P-201ENST00000516428 129 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 RNA5SP121-201ENST00000516537 101 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 AC004812.1-201ENST00000540773 146 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 AC090888.2-201ENST00000559765 1144 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 MIR4781-201ENST00000585250 76 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 PCGEM1.1-201ENST00000613431 131 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 AC006927.4-201ENST00000639187 543 ntBASIC0.42□□□□□ -2.34
TRAV4A0A0B4J268 RNA5SP432-201ENST00000362480 116 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 RNU6-43P-201ENST00000384302 107 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 MIR1276-201ENST00000408707 83 ntBASIC0.41□□□□□ -2.34
TRAV4A0A0B4J268 AC078809.1-201ENST00000427601 140 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms