Protein–RNA interactions for Protein: W4VSP6

Gm5538, MCG67716, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5538W4VSP6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5538W4VSP6 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5538W4VSP6 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5538W4VSP6 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5538W4VSP6 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Gm5538W4VSP6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5538W4VSP6 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5538W4VSP6 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5538W4VSP6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5538W4VSP6 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Gm5538W4VSP6 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gm5538W4VSP6 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gm5538W4VSP6 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Gm5538W4VSP6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Gm5538W4VSP6 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 AC093043.3-201ENSMUST00000226531 2273 ntBASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Gm5538W4VSP6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Gm5538W4VSP6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Otx2os1-206ENSMUST00000228153 787 ntBASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC16.43■□□□□ 0.22
Gm5538W4VSP6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Gm5538W4VSP6 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms