Protein–RNA interactions for Protein: Q9Z2M6

Ubl3, Ubiquitin-like protein 3, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubl3Q9Z2M6 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ubl3Q9Z2M6 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ubl3Q9Z2M6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.36□□□□□ -0.11
Ubl3Q9Z2M6 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ubl3Q9Z2M6 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.34□□□□□ -0.11
Ubl3Q9Z2M6 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms