Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Gm7507-201ENSMUST00000183053 1008 ntBASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Shroom3Q9QXN0 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Shroom3Q9QXN0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Shroom3Q9QXN0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Shroom3Q9QXN0 Gm15372-201ENSMUST00000120729 834 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms