Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Msh5Q9QUM7 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Gm18363-201ENSMUST00000221671 730 ntBASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Msh5Q9QUM7 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Msh5Q9QUM7 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Msh5Q9QUM7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh5Q9QUM7 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Msh5Q9QUM7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh5Q9QUM7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh5Q9QUM7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh5Q9QUM7 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Msh5Q9QUM7 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Msh5Q9QUM7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.52■□□□□ 0.23
Msh5Q9QUM7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
Msh5Q9QUM7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Gm6190-201ENSMUST00000220683 1374 ntBASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Gm7213-201ENSMUST00000215977 950 ntBASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Msh5Q9QUM7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Actl10-202ENSMUST00000226583 1501 ntBASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Msh5Q9QUM7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Msh5Q9QUM7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms