Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Sec61a2Q9JLR1 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Gm11336-201ENSMUST00000118168 334 ntBASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Gm26039-201ENSMUST00000158152 144 ntBASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sec61a2Q9JLR1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sec61a2Q9JLR1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a2Q9JLR1 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a2Q9JLR1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a2Q9JLR1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a2Q9JLR1 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.52□□□□□ -0.08
Sec61a2Q9JLR1 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a2Q9JLR1 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a2Q9JLR1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a2Q9JLR1 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a2Q9JLR1 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sec61a2Q9JLR1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Gm27389-201ENSMUST00000183622 195 ntBASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sec61a2Q9JLR1 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Gm18421-201ENSMUST00000204122 625 ntBASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sec61a2Q9JLR1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms