Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Zfp264-201ENSMUST00000208656 1563 ntBASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cdc40Q9DC48 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Gm24589-201ENSMUST00000116692 94 ntBASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Hivep3-201ENSMUST00000084306 2973 ntBASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cdc40Q9DC48 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 AC133598.3-202ENSMUST00000224219 531 ntBASIC14.96□□□□□ -0.01
Cdc40Q9DC48 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Cdc40Q9DC48 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdc40Q9DC48 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Cdc40Q9DC48 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Cdc40Q9DC48 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Cdc40Q9DC48 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Gm18421-201ENSMUST00000204122 625 ntBASIC14.94□□□□□ -0.02
Cdc40Q9DC48 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
Cdc40Q9DC48 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms