Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rrp8Q9DB85 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 AC122901.1-201ENSMUST00000214203 1790 ntBASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Gm23935-201ENSMUST00000102303 57 ntBASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Gm24270-201ENSMUST00000102326 57 ntBASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Gm24245-201ENSMUST00000157318 57 ntBASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.75■□□□□ 0.11
Rrp8Q9DB85 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Rrp8Q9DB85 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rrp8Q9DB85 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rrp8Q9DB85 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.72■□□□□ 0.11
Rrp8Q9DB85 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 AC132265.1-201ENSMUST00000219233 1665 ntBASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rrp8Q9DB85 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC15.71■□□□□ 0.11
Rrp8Q9DB85 Gm6858-201ENSMUST00000208582 1468 ntBASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms