Protein–RNA interactions for Protein: Q9DA80

Rsph3b, Radial spoke head protein 3 homolog B, mousemouse

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph3bQ9DA80 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph3bQ9DA80 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph3bQ9DA80 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph3bQ9DA80 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Rsph3bQ9DA80 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Rsph3bQ9DA80 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Gm2651-201ENSMUST00000203560 838 ntBASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rsph3bQ9DA80 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Rsph3bQ9DA80 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rsph3bQ9DA80 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rsph3bQ9DA80 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Mir5131-201ENSMUST00000175426 93 ntBASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.6■□□□□ 0.41
Rsph3bQ9DA80 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms