Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf3c6Q9D8P7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf3c6Q9D8P7 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf3c6Q9D8P7 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf3c6Q9D8P7 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gtf3c6Q9D8P7 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gtf3c6Q9D8P7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gtf3c6Q9D8P7 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gtf3c6Q9D8P7 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Gtf3c6Q9D8P7 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.2■□□□□ 0.34
Gtf3c6Q9D8P7 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms