Protein–RNA interactions for Protein: Q9D8B3

Chmp4b, Charged multivesicular body protein 4b, mousemouse

Known RBP Predictions only

Length 224 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4bQ9D8B3 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Chmp4bQ9D8B3 Hivep3-201ENSMUST00000084306 2973 ntBASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Gm23634-201ENSMUST00000175071 91 ntBASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Ighv6-1-201ENSMUST00000193612 343 ntBASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Chmp4bQ9D8B3 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Gm9889-202ENSMUST00000206983 1577 ntBASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 AA414768-201ENSMUST00000121924 1257 ntBASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Chmp4bQ9D8B3 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Chmp4bQ9D8B3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Chmp4bQ9D8B3 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC20.27■□□□□ 0.83
Chmp4bQ9D8B3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Chmp4bQ9D8B3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.83
Chmp4bQ9D8B3 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Chmp4bQ9D8B3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Chmp4bQ9D8B3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC20.25■□□□□ 0.83
Chmp4bQ9D8B3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC20.25■□□□□ 0.83
Chmp4bQ9D8B3 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms