Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC21.17■□□□□ 0.98
U2af1Q9D883 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC21.17■□□□□ 0.98
U2af1Q9D883 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
U2af1Q9D883 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
U2af1Q9D883 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
U2af1Q9D883 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC21.16■□□□□ 0.98
U2af1Q9D883 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC21.16■□□□□ 0.98
U2af1Q9D883 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC21.16■□□□□ 0.98
U2af1Q9D883 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
U2af1Q9D883 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
U2af1Q9D883 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
U2af1Q9D883 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
U2af1Q9D883 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
U2af1Q9D883 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Vti1a-206ENSMUST00000225529 1244 ntBASIC21.15■□□□□ 0.98
U2af1Q9D883 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
U2af1Q9D883 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC21.15■□□□□ 0.98
U2af1Q9D883 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
U2af1Q9D883 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC21.14■□□□□ 0.98
U2af1Q9D883 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
U2af1Q9D883 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
U2af1Q9D883 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
U2af1Q9D883 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2af1Q9D883 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
U2af1Q9D883 Gm11452-201ENSMUST00000122376 690 ntBASIC21.14■□□□□ 0.97
U2af1Q9D883 Gm25406-201ENSMUST00000157599 105 ntBASIC21.14■□□□□ 0.97
U2af1Q9D883 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
U2af1Q9D883 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2af1Q9D883 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
U2af1Q9D883 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2af1Q9D883 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2af1Q9D883 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
U2af1Q9D883 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2af1Q9D883 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
U2af1Q9D883 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
U2af1Q9D883 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
U2af1Q9D883 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
U2af1Q9D883 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC21.13■□□□□ 0.97
U2af1Q9D883 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC21.13■□□□□ 0.97
U2af1Q9D883 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
U2af1Q9D883 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC21.12■□□□□ 0.97
U2af1Q9D883 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
U2af1Q9D883 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC21.12■□□□□ 0.97
U2af1Q9D883 Mir8098-201ENSMUST00000184011 137 ntBASIC21.12■□□□□ 0.97
U2af1Q9D883 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
U2af1Q9D883 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
U2af1Q9D883 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
U2af1Q9D883 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
U2af1Q9D883 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
U2af1Q9D883 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC21.11■□□□□ 0.97
U2af1Q9D883 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
U2af1Q9D883 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
U2af1Q9D883 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms