Protein–RNA interactions for Protein: Q9D620

Rab11fip1, Rab11 family-interacting protein 1, mousemouse

Predictions only

Length 645 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip1Q9D620 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Rab11fip1Q9D620 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Rab11fip1Q9D620 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Rab11fip1Q9D620 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab11fip1Q9D620 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.08■□□□□ 0.33
Rab11fip1Q9D620 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.08■□□□□ 0.33
Rab11fip1Q9D620 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab11fip1Q9D620 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Rab11fip1Q9D620 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rab11fip1Q9D620 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip1Q9D620 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip1Q9D620 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.08■□□□□ 0.32
Rab11fip1Q9D620 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip1Q9D620 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip1Q9D620 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Rab11fip1Q9D620 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip1Q9D620 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip1Q9D620 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Rab11fip1Q9D620 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Rab11fip1Q9D620 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Rab11fip1Q9D620 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms