Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Gm7977-201ENSMUST00000193787 748 ntBASIC16.11■□□□□ 0.17
Snrnp48Q9D361 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 CT009713.7-201ENSMUST00000224689 571 ntBASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Snrnp48Q9D361 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
Snrnp48Q9D361 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 AC132265.1-201ENSMUST00000219233 1665 ntBASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.09■□□□□ 0.17
Snrnp48Q9D361 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Snrnp48Q9D361 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.08■□□□□ 0.17
Snrnp48Q9D361 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Snrnp48Q9D361 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Snrnp48Q9D361 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Snrnp48Q9D361 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Snrnp48Q9D361 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.08■□□□□ 0.17
Snrnp48Q9D361 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Snrnp48Q9D361 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Snrnp48Q9D361 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms