Protein–RNA interactions for Protein: Q9D1X0

Nol3, Nucleolar protein 3, mousemouse

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nol3Q9D1X0 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Gm6659-201ENSMUST00000174752 547 ntBASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Mir6349-201ENSMUST00000184059 97 ntBASIC14.19□□□□□ -0.14
Nol3Q9D1X0 AC166341.7-201ENSMUST00000221698 126 ntBASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Nol3Q9D1X0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Nol3Q9D1X0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Nol3Q9D1X0 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Nol3Q9D1X0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms