Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Gm14464-201ENSMUST00000119658 1254 ntBASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Gm18958-201ENSMUST00000174258 762 ntBASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Gm43183-201ENSMUST00000200632 547 ntBASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.65■□□□□ 0.26
Ddx47Q9CWX9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Gm29257-201ENSMUST00000186115 639 ntBASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 BC037039-201ENSMUST00000192003 2205 ntBASIC16.64■□□□□ 0.25
Ddx47Q9CWX9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Rbfox2-206ENSMUST00000227314 1810 ntBASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Gm43352-201ENSMUST00000196419 3065 ntBASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Ddx47Q9CWX9 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Gm7638-201ENSMUST00000121348 967 ntBASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Il3ra-202ENSMUST00000223589 738 ntBASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Ddx47Q9CWX9 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Ddx47Q9CWX9 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms