Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pfdn1Q9CWM4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pfdn1Q9CWM4 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Pfdn1Q9CWM4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Pfdn1Q9CWM4 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Gm43060-201ENSMUST00000200621 289 ntBASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pfdn1Q9CWM4 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms