Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC18.99■□□□□ 0.63
Smc3Q9CW03 AC159205.6-201ENSMUST00000224935 887 ntBASIC18.99■□□□□ 0.63
Smc3Q9CW03 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Smc3Q9CW03 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.98■□□□□ 0.63
Smc3Q9CW03 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC18.98■□□□□ 0.63
Smc3Q9CW03 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Gm15442-201ENSMUST00000117905 1527 ntBASIC18.98■□□□□ 0.63
Smc3Q9CW03 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC18.98■□□□□ 0.63
Smc3Q9CW03 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Smc3Q9CW03 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC18.97■□□□□ 0.63
Smc3Q9CW03 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc3Q9CW03 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC18.96■□□□□ 0.63
Smc3Q9CW03 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smc3Q9CW03 Gm13559-201ENSMUST00000120476 863 ntBASIC18.96■□□□□ 0.63
Smc3Q9CW03 Gm26039-201ENSMUST00000158152 144 ntBASIC18.96■□□□□ 0.63
Smc3Q9CW03 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc3Q9CW03 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.96■□□□□ 0.63
Smc3Q9CW03 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smc3Q9CW03 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc3Q9CW03 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Smc3Q9CW03 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Smc3Q9CW03 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc3Q9CW03 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc3Q9CW03 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Smc3Q9CW03 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Smc3Q9CW03 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.95■□□□□ 0.62
Smc3Q9CW03 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Mir1668-201ENSMUST00000184114 107 ntBASIC18.95■□□□□ 0.62
Smc3Q9CW03 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Smc3Q9CW03 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms