Protein–RNA interactions for Protein: Q9CVD2

Atxn3, Ataxin-3, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn3Q9CVD2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC20.73■□□□□ 0.91
Atxn3Q9CVD2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atxn3Q9CVD2 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atxn3Q9CVD2 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atxn3Q9CVD2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atxn3Q9CVD2 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atxn3Q9CVD2 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Atxn3Q9CVD2 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Cmtm5-203ENSMUST00000227441 610 ntBASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Atxn3Q9CVD2 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Rbfox2-206ENSMUST00000227314 1810 ntBASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC20.71■□□□□ 0.91
Atxn3Q9CVD2 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Atxn3Q9CVD2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Atxn3Q9CVD2 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Gm25745-201ENSMUST00000174945 133 ntBASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 AC108846.1-201ENSMUST00000214531 513 ntBASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Atxn3Q9CVD2 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Gm7506-201ENSMUST00000207758 815 ntBASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Umpk-ps-201ENSMUST00000211897 827 ntBASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Atxn3Q9CVD2 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms