Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Chchd1Q9CQA6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Golgb1-201ENSMUST00000023534 498 ntBASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Chchd1Q9CQA6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Mir6538-201ENSMUST00000183713 110 ntBASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Gm43399-201ENSMUST00000202546 2374 ntBASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Chchd1Q9CQA6 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Gm13534-201ENSMUST00000121169 513 ntBASIC12.22□□□□□ -0.45
Chchd1Q9CQA6 Gm14281-201ENSMUST00000121700 1294 ntBASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms