Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.22□□□□□ -0.29
H2afb1Q9CQ70 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC13.22□□□□□ -0.29
H2afb1Q9CQ70 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb1Q9CQ70 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb1Q9CQ70 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
H2afb1Q9CQ70 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb1Q9CQ70 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
H2afb1Q9CQ70 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb1Q9CQ70 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
H2afb1Q9CQ70 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
H2afb1Q9CQ70 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
H2afb1Q9CQ70 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb1Q9CQ70 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
H2afb1Q9CQ70 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb1Q9CQ70 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb1Q9CQ70 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb1Q9CQ70 Gm8668-201ENSMUST00000120559 1447 ntBASIC13.21□□□□□ -0.3
H2afb1Q9CQ70 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb1Q9CQ70 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb1Q9CQ70 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.21□□□□□ -0.3
H2afb1Q9CQ70 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
H2afb1Q9CQ70 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
H2afb1Q9CQ70 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Gm21559-201ENSMUST00000220638 855 ntBASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Gm8587-201ENSMUST00000076538 843 ntBASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Ntrk2-205ENSMUST00000224402 2284 ntBASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
H2afb1Q9CQ70 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.18□□□□□ -0.3
H2afb1Q9CQ70 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms