Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Gm15173-201ENSMUST00000122049 433 ntBASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Prpf8Q99PV0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Gm42670-201ENSMUST00000201816 1292 ntBASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Prpf8Q99PV0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Gm4995-201ENSMUST00000117247 432 ntBASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Gm14822-201ENSMUST00000122247 291 ntBASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Prpf8Q99PV0 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Gm4459-201ENSMUST00000118750 468 ntBASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Prpf8Q99PV0 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms