Protein–RNA interactions for Protein: Q99PP9

Trim16, Tripartite motif-containing protein 16, mousemouse

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim16Q99PP9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Gm27389-201ENSMUST00000183622 195 ntBASIC15.79■□□□□ 0.12
Trim16Q99PP9 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.79■□□□□ 0.12
Trim16Q99PP9 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC15.79■□□□□ 0.12
Trim16Q99PP9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trim16Q99PP9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.78■□□□□ 0.12
Trim16Q99PP9 Phf7-203ENSMUST00000226565 1971 ntBASIC15.78■□□□□ 0.12
Trim16Q99PP9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Gm6190-201ENSMUST00000220683 1374 ntBASIC15.78■□□□□ 0.12
Trim16Q99PP9 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trim16Q99PP9 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Trim16Q99PP9 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC15.77■□□□□ 0.12
Trim16Q99PP9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trim16Q99PP9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC15.77■□□□□ 0.12
Trim16Q99PP9 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Trim16Q99PP9 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trim16Q99PP9 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trim16Q99PP9 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms