Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh15Q99PJ1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh15Q99PJ1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh15Q99PJ1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh15Q99PJ1 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh15Q99PJ1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh15Q99PJ1 Gm25287-201ENSMUST00000103846 110 ntBASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Gm22918-201ENSMUST00000103855 110 ntBASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Wdyhv1-203ENSMUST00000226889 394 ntBASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Gm42939-201ENSMUST00000197514 2205 ntBASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 AC131710.1-201ENSMUST00000228336 990 ntBASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh15Q99PJ1 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh15Q99PJ1 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Gm27437-201ENSMUST00000183429 107 ntBASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 AC166341.4-201ENSMUST00000220625 123 ntBASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh15Q99PJ1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdh15Q99PJ1 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh15Q99PJ1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC18.14■□□□□ 0.49
Pcdh15Q99PJ1 Gm27618-201ENSMUST00000183671 60 ntBASIC18.14■□□□□ 0.49
Pcdh15Q99PJ1 AC127302.2-201ENSMUST00000215212 268 ntBASIC18.14■□□□□ 0.49
Pcdh15Q99PJ1 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh15Q99PJ1 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh15Q99PJ1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh15Q99PJ1 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh15Q99PJ1 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh15Q99PJ1 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdh15Q99PJ1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Gm12151-201ENSMUST00000121374 290 ntBASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdh15Q99PJ1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh15Q99PJ1 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh15Q99PJ1 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
Pcdh15Q99PJ1 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh15Q99PJ1 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdh15Q99PJ1 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdh15Q99PJ1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh15Q99PJ1 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh15Q99PJ1 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh15Q99PJ1 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdh15Q99PJ1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms