Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Col25a1Q99MQ5 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 AC130829.1-201ENSMUST00000221548 494 ntBASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Col25a1Q99MQ5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.66■□□□□ 0.26
Col25a1Q99MQ5 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Gm22175-201ENSMUST00000175007 78 ntBASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 AC124732.2-201ENSMUST00000221977 316 ntBASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Col25a1Q99MQ5 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.64■□□□□ 0.26
Col25a1Q99MQ5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Col25a1Q99MQ5 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms