Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.09■□□□□ 0.17
Cstf1Q99LC2 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Cstf1Q99LC2 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cstf1Q99LC2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.08■□□□□ 0.17
Cstf1Q99LC2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cstf1Q99LC2 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cstf1Q99LC2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cstf1Q99LC2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cstf1Q99LC2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cstf1Q99LC2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Cstf1Q99LC2 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cstf1Q99LC2 H2af-ps-201ENSMUST00000119066 295 ntBASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Gm9889-202ENSMUST00000206983 1577 ntBASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Cstf1Q99LC2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Mir8117-201ENSMUST00000184773 107 ntBASIC16.07■□□□□ 0.16
Cstf1Q99LC2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
Cstf1Q99LC2 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Gm14701-201ENSMUST00000117156 348 ntBASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Chchd1-203ENSMUST00000224633 557 ntBASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cstf1Q99LC2 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Cstf1Q99LC2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Cstf1Q99LC2 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms