Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Mir3113-201ENSMUST00000175478 76 ntBASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Ndufaf2-202ENSMUST00000223734 556 ntBASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Gm10175-201ENSMUST00000086013 645 ntBASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Smarcd2Q99JR8 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Gm11873-201ENSMUST00000117877 1304 ntBASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Mir8117-201ENSMUST00000184773 107 ntBASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Smarcd2Q99JR8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Smarcd2Q99JR8 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Gm25911-201ENSMUST00000157621 56 ntBASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Smarcd2Q99JR8 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Smarcd2Q99JR8 Gm8344-201ENSMUST00000119813 856 ntBASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms