Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rfc4Q99J62 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.53■□□□□ 0.56
Rfc4Q99J62 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Rfc4Q99J62 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfc4Q99J62 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfc4Q99J62 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfc4Q99J62 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfc4Q99J62 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfc4Q99J62 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfc4Q99J62 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
Rfc4Q99J62 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfc4Q99J62 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC18.52■□□□□ 0.56
Rfc4Q99J62 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC18.52■□□□□ 0.56
Rfc4Q99J62 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rfc4Q99J62 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfc4Q99J62 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Rfc4Q99J62 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Rfc4Q99J62 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfc4Q99J62 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Rfc4Q99J62 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC18.52■□□□□ 0.55
Rfc4Q99J62 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Gm26308-201ENSMUST00000157768 69 ntBASIC18.51■□□□□ 0.55
Rfc4Q99J62 Mir3113-201ENSMUST00000175478 76 ntBASIC18.51■□□□□ 0.55
Rfc4Q99J62 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfc4Q99J62 AC159106.1-201ENSMUST00000224421 690 ntBASIC18.51■□□□□ 0.55
Rfc4Q99J62 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfc4Q99J62 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Rfc4Q99J62 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfc4Q99J62 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfc4Q99J62 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfc4Q99J62 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rfc4Q99J62 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfc4Q99J62 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfc4Q99J62 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Rfc4Q99J62 Gm25911-201ENSMUST00000157621 56 ntBASIC18.5■□□□□ 0.55
Rfc4Q99J62 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC18.5■□□□□ 0.55
Rfc4Q99J62 AC151286.1-201ENSMUST00000198489 145 ntBASIC18.5■□□□□ 0.55
Rfc4Q99J62 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC18.5■□□□□ 0.55
Rfc4Q99J62 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfc4Q99J62 Gm10175-201ENSMUST00000086013 645 ntBASIC18.5■□□□□ 0.55
Rfc4Q99J62 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfc4Q99J62 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rfc4Q99J62 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
Rfc4Q99J62 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Rfc4Q99J62 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Mir8117-201ENSMUST00000184773 107 ntBASIC18.49■□□□□ 0.55
Rfc4Q99J62 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.49■□□□□ 0.55
Rfc4Q99J62 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Rfc4Q99J62 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rfc4Q99J62 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms