Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd1Q99J36 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd1Q99J36 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Thumpd1Q99J36 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Thumpd1Q99J36 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.41□□□□□ -0.1
Thumpd1Q99J36 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Gm10698-201ENSMUST00000182663 604 ntBASIC14.4□□□□□ -0.1
Thumpd1Q99J36 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Gm44878-201ENSMUST00000205812 1295 ntBASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Timm23-208ENSMUST00000226683 750 ntBASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Gm44729-201ENSMUST00000206759 2052 ntBASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Thumpd1Q99J36 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Thumpd1Q99J36 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Thumpd1Q99J36 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Thumpd1Q99J36 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Phf7-203ENSMUST00000226565 1971 ntBASIC14.37□□□□□ -0.11
Thumpd1Q99J36 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms