Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.99■□□□□ 0.63
Col20a1Q923P0 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col20a1Q923P0 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Gm1401-201ENSMUST00000122048 772 ntBASIC18.99■□□□□ 0.63
Col20a1Q923P0 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC18.99■□□□□ 0.63
Col20a1Q923P0 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col20a1Q923P0 Gm8784-201ENSMUST00000222096 1435 ntBASIC18.98■□□□□ 0.63
Col20a1Q923P0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col20a1Q923P0 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col20a1Q923P0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col20a1Q923P0 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col20a1Q923P0 Haglr-201ENSMUST00000100000 2085 ntBASIC18.98■□□□□ 0.63
Col20a1Q923P0 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col20a1Q923P0 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Col20a1Q923P0 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Col20a1Q923P0 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC18.98■□□□□ 0.63
Col20a1Q923P0 Gm6550-201ENSMUST00000187574 993 ntBASIC18.98■□□□□ 0.63
Col20a1Q923P0 Gm37500-201ENSMUST00000192059 1443 ntBASIC18.98■□□□□ 0.63
Col20a1Q923P0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC18.98■□□□□ 0.63
Col20a1Q923P0 Gm18622-201ENSMUST00000219361 595 ntBASIC18.98■□□□□ 0.63
Col20a1Q923P0 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col20a1Q923P0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC18.97■□□□□ 0.63
Col20a1Q923P0 AV026068-213ENSMUST00000223675 1171 ntBASIC18.97■□□□□ 0.63
Col20a1Q923P0 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col20a1Q923P0 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Gm7222-201ENSMUST00000117512 906 ntBASIC18.96■□□□□ 0.63
Col20a1Q923P0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col20a1Q923P0 Gm3928-201ENSMUST00000121141 1307 ntBASIC18.95■□□□□ 0.62
Col20a1Q923P0 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col20a1Q923P0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC18.95■□□□□ 0.62
Col20a1Q923P0 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col20a1Q923P0 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col20a1Q923P0 AC154527.4-201ENSMUST00000224364 1667 ntBASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms