Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b3Q921M3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b3Q921M3 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b3Q921M3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.34■□□□□ 0.69
Sf3b3Q921M3 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b3Q921M3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b3Q921M3 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b3Q921M3 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sf3b3Q921M3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3b3Q921M3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sf3b3Q921M3 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Gm11185-201ENSMUST00000117732 1007 ntBASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Gm6257-201ENSMUST00000163864 910 ntBASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Gm5253-201ENSMUST00000187104 1025 ntBASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Gm7229-201ENSMUST00000214719 1007 ntBASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Sf3b3Q921M3 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 AC151286.1-201ENSMUST00000198489 145 ntBASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sf3b3Q921M3 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 AC159295.1-201ENSMUST00000225326 940 ntBASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sf3b3Q921M3 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Gm4913-201ENSMUST00000117075 1290 ntBASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sf3b3Q921M3 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Gm19164-201ENSMUST00000210667 640 ntBASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Gm15500-202ENSMUST00000071641 1019 ntBASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sf3b3Q921M3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms