Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm44454-201ENSMUST00000198541 138 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm44314-201ENSMUST00000199263 138 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm44394-201ENSMUST00000199558 138 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm44484-201ENSMUST00000199873 138 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm44466-201ENSMUST00000200264 138 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Gm44359-201ENSMUST00000200671 138 ntBASIC18.56■□□□□ 0.56
Smc1bQ920F6 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
Smc1bQ920F6 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smc1bQ920F6 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Gm11779-201ENSMUST00000118541 368 ntBASIC18.55■□□□□ 0.56
Smc1bQ920F6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18.55■□□□□ 0.56
Smc1bQ920F6 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.55■□□□□ 0.56
Smc1bQ920F6 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Smc1bQ920F6 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Gm27000-201ENSMUST00000182943 842 ntBASIC18.54■□□□□ 0.56
Smc1bQ920F6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Smc1bQ920F6 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Phf7-203ENSMUST00000226565 1971 ntBASIC18.53■□□□□ 0.56
Smc1bQ920F6 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Smc1bQ920F6 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc1bQ920F6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc1bQ920F6 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.52■□□□□ 0.56
Smc1bQ920F6 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc1bQ920F6 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc1bQ920F6 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc1bQ920F6 Gm15165-201ENSMUST00000118140 502 ntBASIC18.52■□□□□ 0.56
Smc1bQ920F6 Gm27867-201ENSMUST00000184778 125 ntBASIC18.52■□□□□ 0.56
Smc1bQ920F6 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC18.52■□□□□ 0.56
Smc1bQ920F6 Gm43575-201ENSMUST00000196420 516 ntBASIC18.52■□□□□ 0.56
Smc1bQ920F6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Smc1bQ920F6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms