Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdha8Q91Y12 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Gm13836-201ENSMUST00000121159 501 ntBASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Gm9013-201ENSMUST00000132939 882 ntBASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdha8Q91Y12 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdha8Q91Y12 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Gm11860-201ENSMUST00000122346 1010 ntBASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pcdha8Q91Y12 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha8Q91Y12 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha8Q91Y12 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha8Q91Y12 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha8Q91Y12 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Pcdha8Q91Y12 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pcdha8Q91Y12 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms