Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Gm1818-201ENSMUST00000169406 1184 ntBASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Ank2-226ENSMUST00000189368 339 ntBASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdha9Q91Y11 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdha9Q91Y11 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.14■□□□□ 0.34
Pcdha9Q91Y11 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdha9Q91Y11 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC17.14■□□□□ 0.34
Pcdha9Q91Y11 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Gm44454-201ENSMUST00000198541 138 ntBASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdha9Q91Y11 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Rbfox2-206ENSMUST00000227314 1810 ntBASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdha9Q91Y11 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Gm15372-201ENSMUST00000120729 834 ntBASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Gm18669-201ENSMUST00000216049 778 ntBASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Pcdha9Q91Y11 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Pcdha9Q91Y11 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms