Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb22Q91XZ8 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pcdhb22Q91XZ8 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.82■□□□□ 0.6
Pcdhb22Q91XZ8 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC18.82■□□□□ 0.6
Pcdhb22Q91XZ8 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pcdhb22Q91XZ8 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Gm12895-201ENSMUST00000122214 226 ntBASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Gm8349-201ENSMUST00000182720 1003 ntBASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 AC127349.1-201ENSMUST00000224590 266 ntBASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pcdhb22Q91XZ8 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Gm26917-202ENSMUST00000192833 3329 ntBASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdhb22Q91XZ8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Gm15165-201ENSMUST00000118140 502 ntBASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdhb22Q91XZ8 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Gm9103-201ENSMUST00000119371 405 ntBASIC18.77■□□□□ 0.6
Pcdhb22Q91XZ8 Gm28033-201ENSMUST00000184224 96 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms