Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC18.97■□□□□ 0.63
Pcdhb5Q91XZ5 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC18.97■□□□□ 0.63
Pcdhb5Q91XZ5 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb5Q91XZ5 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb5Q91XZ5 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb5Q91XZ5 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb5Q91XZ5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb5Q91XZ5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb5Q91XZ5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pcdhb5Q91XZ5 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Gm25925-201ENSMUST00000158314 306 ntBASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Gm9727-201ENSMUST00000161387 555 ntBASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC18.96■□□□□ 0.63
Pcdhb5Q91XZ5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pcdhb5Q91XZ5 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Gm14494-201ENSMUST00000118786 435 ntBASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Gm27646-201ENSMUST00000183989 110 ntBASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 CT943659.1-201ENSMUST00000215459 326 ntBASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pcdhb5Q91XZ5 AC131586.3-201ENSMUST00000228355 1367 ntBASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 AC122901.1-201ENSMUST00000214203 1790 ntBASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 AC084391.1-201ENSMUST00000200651 141 ntBASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pcdhb5Q91XZ5 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms