Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Pcdhgc5Q91XW9 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgc5Q91XW9 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgc5Q91XW9 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgc5Q91XW9 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgc5Q91XW9 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC18.33■□□□□ 0.53
Pcdhgc5Q91XW9 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgc5Q91XW9 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgc5Q91XW9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pcdhgc5Q91XW9 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC18.33■□□□□ 0.53
Pcdhgc5Q91XW9 Gm11779-201ENSMUST00000118541 368 ntBASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pcdhgc5Q91XW9 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Gm13830-205ENSMUST00000201195 1155 ntBASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pcdhgc5Q91XW9 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pcdhgc5Q91XW9 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Gm5264-201ENSMUST00000190584 848 ntBASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pcdhgc5Q91XW9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pcdhgc5Q91XW9 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms