Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
StrcQ8VIM6 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
StrcQ8VIM6 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
StrcQ8VIM6 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
StrcQ8VIM6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
StrcQ8VIM6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
StrcQ8VIM6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
StrcQ8VIM6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
StrcQ8VIM6 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
StrcQ8VIM6 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
StrcQ8VIM6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.14■□□□□ 0.66
StrcQ8VIM6 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC19.14■□□□□ 0.65
StrcQ8VIM6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
StrcQ8VIM6 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
StrcQ8VIM6 H2-Pa-201ENSMUST00000182803 626 ntBASIC19.14■□□□□ 0.65
StrcQ8VIM6 Mir6977-201ENSMUST00000184960 64 ntBASIC19.14■□□□□ 0.65
StrcQ8VIM6 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC19.14■□□□□ 0.65
StrcQ8VIM6 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
StrcQ8VIM6 AC131710.1-201ENSMUST00000228336 990 ntBASIC19.14■□□□□ 0.65
StrcQ8VIM6 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
StrcQ8VIM6 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
StrcQ8VIM6 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
StrcQ8VIM6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
StrcQ8VIM6 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
StrcQ8VIM6 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
StrcQ8VIM6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
StrcQ8VIM6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC19.13■□□□□ 0.65
StrcQ8VIM6 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
StrcQ8VIM6 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.13■□□□□ 0.65
StrcQ8VIM6 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
StrcQ8VIM6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
StrcQ8VIM6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.12■□□□□ 0.65
StrcQ8VIM6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
StrcQ8VIM6 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
StrcQ8VIM6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.11■□□□□ 0.65
StrcQ8VIM6 Gm15693-201ENSMUST00000120470 637 ntBASIC19.11■□□□□ 0.65
StrcQ8VIM6 Gm12151-201ENSMUST00000121374 290 ntBASIC19.11■□□□□ 0.65
StrcQ8VIM6 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
StrcQ8VIM6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
StrcQ8VIM6 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
StrcQ8VIM6 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC19.11■□□□□ 0.65
StrcQ8VIM6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
StrcQ8VIM6 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC19.11■□□□□ 0.65
StrcQ8VIM6 Gm29361-201ENSMUST00000183323 2000 ntBASIC19.11■□□□□ 0.65
StrcQ8VIM6 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
StrcQ8VIM6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
StrcQ8VIM6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.11■□□□□ 0.65
StrcQ8VIM6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
StrcQ8VIM6 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
StrcQ8VIM6 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
StrcQ8VIM6 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
StrcQ8VIM6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC19.1■□□□□ 0.65
StrcQ8VIM6 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
StrcQ8VIM6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
StrcQ8VIM6 Gm27437-201ENSMUST00000183429 107 ntBASIC19.1■□□□□ 0.65
StrcQ8VIM6 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.1■□□□□ 0.65
StrcQ8VIM6 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
StrcQ8VIM6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
StrcQ8VIM6 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
StrcQ8VIM6 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
StrcQ8VIM6 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
StrcQ8VIM6 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
StrcQ8VIM6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.1■□□□□ 0.65
StrcQ8VIM6 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC19.09■□□□□ 0.65
StrcQ8VIM6 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
StrcQ8VIM6 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.09■□□□□ 0.65
StrcQ8VIM6 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
StrcQ8VIM6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms