Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Dancr-204ENSMUST00000132389 2347 ntBASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Gm15442-201ENSMUST00000117905 1527 ntBASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H1fooQ8VIK3 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H1fooQ8VIK3 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
H1fooQ8VIK3 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
H1fooQ8VIK3 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H1fooQ8VIK3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H1fooQ8VIK3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
H1fooQ8VIK3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
H1fooQ8VIK3 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H1fooQ8VIK3 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC13.52□□□□□ -0.24
H1fooQ8VIK3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
H1fooQ8VIK3 Gm14464-201ENSMUST00000119658 1254 ntBASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
H1fooQ8VIK3 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Gm37722-201ENSMUST00000193757 208 ntBASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Gm36967-201ENSMUST00000193814 266 ntBASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC13.51□□□□□ -0.25
H1fooQ8VIK3 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
H1fooQ8VIK3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms