Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Pcdh18Q8VHR0 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Gm44291-201ENSMUST00000203102 2865 ntBASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Pcdh18Q8VHR0 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Gm9731-201ENSMUST00000209480 747 ntBASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdh18Q8VHR0 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Gm38027-201ENSMUST00000192315 235 ntBASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Pcdh18Q8VHR0 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Gm7638-201ENSMUST00000121348 967 ntBASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdh18Q8VHR0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms