Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Lmcd1Q8VEE1 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Mir6404-201ENSMUST00000183699 94 ntBASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Mir6990-201ENSMUST00000183724 91 ntBASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Gm7787-201ENSMUST00000216858 688 ntBASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Lmcd1Q8VEE1 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm4609-201ENSMUST00000106443 1002 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm5138-201ENSMUST00000113842 1002 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm15191-201ENSMUST00000117933 1000 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm12182-201ENSMUST00000118655 1008 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm12428-201ENSMUST00000119844 727 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm13882-201ENSMUST00000120886 1002 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm10284-201ENSMUST00000145057 1005 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm10481-201ENSMUST00000179228 1002 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm2574-201ENSMUST00000181051 1002 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm3200-201ENSMUST00000181493 1002 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm4518-201ENSMUST00000182638 718 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm8330-201ENSMUST00000182754 1008 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm4575-201ENSMUST00000182991 1002 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm8709-201ENSMUST00000183230 1012 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm10293-201ENSMUST00000076317 1002 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm6316-201ENSMUST00000082064 1020 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Lmcd1Q8VEE1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC17.09■□□□□ 0.33
Lmcd1Q8VEE1 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms