Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Q8VDP2 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.82■□□□□ 0.12
Q8VDP2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Q8VDP2 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
Q8VDP2 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.81■□□□□ 0.12
Q8VDP2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Q8VDP2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC15.81■□□□□ 0.12
Q8VDP2 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.81■□□□□ 0.12
Q8VDP2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Q8VDP2 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.8■□□□□ 0.12
Q8VDP2 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Q8VDP2 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.8■□□□□ 0.12
Q8VDP2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC15.8■□□□□ 0.12
Q8VDP2 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Q8VDP2 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.8■□□□□ 0.12
Q8VDP2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.8■□□□□ 0.12
Q8VDP2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Q8VDP2 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Q8VDP2 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Q8VDP2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC15.8■□□□□ 0.12
Q8VDP2 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Q8VDP2 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Q8VDP2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Q8VDP2 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Q8VDP2 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Gm27528-202ENSMUST00000222916 2012 ntBASIC15.79■□□□□ 0.12
Q8VDP2 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Q8VDP2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.79■□□□□ 0.12
Q8VDP2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Q8VDP2 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Q8VDP2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Q8VDP2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Q8VDP2 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.79■□□□□ 0.12
Q8VDP2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Q8VDP2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Q8VDP2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Q8VDP2 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Q8VDP2 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Q8VDP2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Q8VDP2 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Q8VDP2 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.78■□□□□ 0.12
Q8VDP2 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Q8VDP2 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Q8VDP2 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Q8VDP2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Q8VDP2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms